myRT

myRT report for GCA_002075725.1_ASM207572v1

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Seq: MRXS01000019.1 Cronobacter sakazakii strain MOD1-32B1C 32B1C_contig_19, whole genome shotgun sequence (48886 bp)
Overview 1 RT 1: 33920-42029 bp Neighborhood of RT #1 [33920, 42040] RadC DUF932 RVT-Retrons UvrD UvrD YbjD Feature: gene Location: 33920-34393 bp Ori: PUY05686.1 Feature: domain Description: RadC Location: 33971-34391 bp Feature: domain Description: RadC Location: 33971 -34391 bp Feature: gene Location: 34426-35247 bp Ori: PUY05687.1 Feature: domain Description: DUF932 Location: 34537-35212 bp Feature: domain Description: DUF932 Location: 34537-3521 2 bp Feature: gene Location: 37032-38183 bp Ori: PUY05688.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37275-37914 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37275-3791 4 bp Feature: gene Location: 38448-40175 bp Ori: PUY05689.1 Feature: domain Description: UvrD Location: 38454-39324 bp Feature: domain Description: UvrD Location: 38454-39324 bp Feature: domain Description: UvrD Location: 40020-40089 bp Feature: domain Description: UvrD Location: 40020-40089 bp Feature: gene Location: 40172-42040 bp Ori: PUY05690.1 Feature: domain Description: YbjD Location: 40175-42029 bp Feature: domain Description: YbjD Location: 401 75-42029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), DUF932 (pfam06067), RVT-Retrons, UvrD (COG0210), YbjD (COG3593)

Seq: MRXS01000024.1 Cronobacter sakazakii strain MOD1-32B1C 32B1C_contig_24, whole genome shotgun sequence (107246 bp)
Overview 1 RT 1: 65844-70314 bp Neighborhood of RT #1 [65844, 70385] umuC PRK10276 RVT-UG2 umuC DUF2251 Feature: gene Location: 65844-67109 bp Feature: domain Description: umuC Location: 65847-67101 bp Feature: domain Description: umuC Location: 65847-67101 bp Feature: gene Location: 67012-67317 bp Ori: PUY04407.1 Feature: domain Description: PRK10276 Location: 67015-67207 bp Feature: domain Description: PRK102 76 Location: 67015-672 07 bp Feature: gene Location: 68128-69414 bp Ori: PUY04408.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 68329-69121 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6832 9-6912 1 bp Feature: gene Location: 69522-69784 bp Feature: domain Description: umuC Location: 69531-69588 bp Feature: domain Description: umuC Location: 69531-69588 bp Feature: gene Location: 69981-70385 bp Ori: PUY04409.1 Feature: domain Description: DUF2251 Location: 70053-70314 bp Feature: domain Description: DUF2 2 51 Location: 70053-70314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-UG2, DUF2251 (pfam10008)