myRT

myRT report for GCA_002077945.1_ASM207794v1

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Seq: LVYD01000116.1 Niastella vici strain DJ57 contig82, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 1-2609 bp Neighborhood of RT #1 [1, 2609] RVT-GII Feature: gene Location: 1-674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-673 bp Feature: gene Location: 1689-2609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVYD01000112.1 Niastella vici strain DJ57 contig79, whole genome shotgun sequence (3956 bp)
Overview 1 RT 1: 1-1256 bp Neighborhood of RT #1 [1, 1256] RVT-GII Feature: gene Location: 1-674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 65-673 bp Feature: gene Location: 736-921 bp Feature: gene Location: 921-1256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVYD01000016.1 Niastella vici strain DJ57 contig112, whole genome shotgun sequence (665 bp)
Overview 1 RT 1: 1-661 bp Neighborhood of RT #1 [1, 665] RVT-GII Feature: gene Location: 1-665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVYD01000013.1 Niastella vici strain DJ57 contig11, whole genome shotgun sequence (436819 bp)
Overview 1 RT 1: 90522-100787 bp Neighborhood of RT #1 [90522, 100787] WGR_DNA_ligase HEAT_2 RVT-Retrons YddW HYR HYR Por_Secre_tail Feature: gene Location: 90522-93830 bp Feature: domain Description: WGR_DNA_ligase Location: 90546-90762 bp Feature: domain Description: WGR_DNA_ligase Location: 9054 6-90762 bp Feature: domain Description: HEAT_2 Location: 90939-91131 bp Feature: domain Description: HEAT_2 Location: 90939-91131 bp Feature: gene Location: 93877-95538 bp Feature: gene Location: 95902-97410 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96448-97057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 964 4 8-97057 bp Feature: gene Location: 97494-100151 bp Feature: domain Description: YddW Location: 97554-98733 bp Feature: domain Description: YddW Location: 97554 -98733 bp Feature: domain Description: HYR Location: 99021-99246 bp Feature: domain Description: HYR Location: 99021-9924 6 bp Feature: domain Description: HYR Location: 99438-99558 bp Feature: domain Description: HYR Location: 994 38-99558 bp Feature: domain Description: Por_Secre_tail Location: 99924-100140 bp Feature: domain Description: Por_Secre_tail Location: 99924 -10014 0 bp Feature: gene Location: 100362-100787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), RVT-Retrons, YddW (COG1649), HYR (pfam02494), Por_Secre_tail (TIGR04183)

Seq: LVYD01000041.1 Niastella vici strain DJ57 contig14, whole genome shotgun sequence (404760 bp)
Overview 1 RT 1: 146627-150463 bp Neighborhood of RT #1 [146627, 150463] HTH_XRE RVT-Retrons Exonuc_VII_L Feature: gene Location: 146627-146881 bp Feature: gene Location: 146905-147207 bp Feature: domain Description: HTH_XRE Location: 146917-147076 bp Feature: domain Description: HTH_XRE Location: 146917-147076 bp Feature: gene Location: 147197-148000 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147332-147848 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147332-147848 bp Feature: gene Location: 148004-149110 bp Feature: domain Description: Exonuc_VII_L Location: 148475-149009 bp Feature: domain Description: Exonuc_VII_L Location: 148475 -149009 bp Feature: gene Location: 149615-150463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Exonuc_VII_L (pfam02601)

Seq: LVYD01000127.1 Niastella vici strain DJ57 contig92, whole genome shotgun sequence (1485 bp)
Overview 1 RT 1: 196-1270 bp Neighborhood of RT #1 [196, 1464] RVT-GII GIIM Feature: gene Location: 196-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1012 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1270 bp Feature: domain Description: GIIM Note: maturase Location: 106 6 -1270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LVYD01000061.1 Niastella vici strain DJ57 contig32, whole genome shotgun sequence (114662 bp)
Overview 1 RT 1: 111165-113972 bp Neighborhood of RT #1 [111165, 114151] YgiN AraC RVT-GII GIIM Feature: gene Location: 111165-111461 bp Feature: domain Description: YgiN Location: 111180-111456 bp Feature: domain Description: YgiN Location: 111180-111456 bp Feature: gene Location: 111548-112444 bp Feature: domain Description: AraC Location: 112130-112433 bp Feature: domain Description: AraC Location: 112130-112433 bp Feature: gene Location: 112898-114151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113096-113711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113096-1137 11 bp Feature: domain Description: GIIM Note: maturase Location: 113768-113972 bp Feature: domain Description: GIIM Note: maturase Location: 1137 68-11397 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgiN (COG1359), AraC (COG2207), RVT-GII, GIIM (pfam08388)