myRT

myRT report for GCA_002080635.1_ASM208063v1

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Seq: NACV01000350.1 Escherichia coli strain 12 12_NODE_1332_length_1920_cov_24.747396, whole genome shotgun sequence (1950 bp)
Overview 1 RT 1: 89-1757 bp Neighborhood of RT #1 [89, 1843] RVT-GII GIIM Feature: gene Location: 89-229 bp Feature: gene Location: 593-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1 454 bp Feature: domain Description: GIIM Note: maturase Location: 1535-1757 bp Feature: domain Description: GIIM Note: maturase Location: 1 535-1 757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NACV01000136.1 Escherichia coli strain 12 12_NODE_399_length_4890_cov_28.203068, whole genome shotgun sequence (4920 bp)
Overview 1 RT 1: 1695-4915 bp Neighborhood of RT #1 [1695, 4917] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 1695-1994 bp Feature: domain Description: InsE Location: 1725-1989 bp Feature: domain Description: InsE Location: 172 5-1989 bp Feature: gene Location: 1991-2458 bp Feature: domain Description: PHA02517 Location: 2057-2396 bp Feature: domain Description: PHA02 517 Location: 2 057-2 396 bp Feature: gene Location: 3050-4291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3323-4055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 3-4055 bp Feature: domain Description: GIIM Note: maturase Location: 4130-4286 bp Feature: domain Description: GIIM Note: maturase Location: 4130-42 86 bp Feature: gene Location: 4343-4573 bp Feature: gene Location: 4684-4917 bp Feature: domain Description: Tra5 Location: 4690-4915 bp Feature: domain Description: Tra5 Location: 4690-4915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: NACV01000218.1 Escherichia coli strain 12 12_NODE_603_length_12100_cov_20.914959, whole genome shotgun sequence (12130 bp)
Overview 1 RT 1: 1-1312 bp Neighborhood of RT #1 [1, 1344] RVT-GII trans_reg_C Feature: gene Location: 1-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-184 bp Feature: gene Location: 430-771 bp Feature: gene Location: 1069-1344 bp Feature: domain Description: trans_reg_C Location: 1114-1312 bp Feature: domain Description: trans_reg_C Location: 1114-13 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, trans_reg_C (cd00383)