myRT

myRT report for GCA_002083285.2_ASM208328v2

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Seq: NBTE02000004.1 Yersinia enterocolitica strain FDAARGOS_225 scf7180000000011_quiver_pilon, whole genome shotgun sequence (3944295 bp)
Overview 1 RT 1: 3044110-3049120 bp 2 RT 2: 3341463-3346872 bp Neighborhood of RT #1 [3044110, 3049137] PRK09678 RVT-Retrons PRK09692 AlpA Neighborhood of RT #2 [3341463, 3346925] Ogr_Delta SLATT_5 RVT-UG17 PRK09692 FocA Feature: gene Location: 3044110-3044355 bp Ori: PNM13687.1 Feature: domain Description: PRK09678 Location: 3044113-3044269 bp Feature: domain Description: PRK09678 Location: 30441 1 3-3044269 bp Feature: gene Location: 3044684-3045436 bp Feature: gene Location: 3045454-3046677 bp Ori: PNM13689.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3045604-3046222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3045604-3046222 bp Feature: gene Location: 3047007-3048203 bp Ori: PNM13690.1 Feature: domain Description: PRK09692 Location: 3047010-3048183 bp Feature: domain Description: PRK09692 Location: 304701 0-30481 83 bp Feature: gene Location: 3048934-3049137 bp Ori: PNM13691.1 Feature: domain Description: AlpA Location: 3048943-3049120 bp Feature: domain Description: AlpA Location: 3048943-30491 20 bp Feature: gene Location: 3341463-3341810 bp Ori: PNM13932.1 Feature: domain Description: Ogr_Delta Location: 3341487-3341622 bp Feature: domain Description: Ogr_Delta Location: 3341 487-3341 622 bp Feature: gene Location: 3342530-3343114 bp Ori: PNM13933.1 Feature: domain Description: SLATT_5 Location: 3342545-3343076 bp Feature: domain Description: SLATT_5 Location: 3342545-3343076 bp Feature: gene Location: 3343092-3344426 bp Ori: PNM13934.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3343320-3343923 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3343320-3343923 bp Feature: gene Location: 3344423-3345604 bp Ori: PNM13935.1 Feature: domain Description: PRK09692 Location: 3344432-3345581 bp Feature: domain Description: PRK09692 Location: 3344432-3345581 bp Feature: gene Location: 3346014-3346925 bp Ori: PNM13936.1 Feature: domain Description: FocA Location: 3346104-3346872 bp Feature: domain Description: FocA Location: 33461 04-3346872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, PRK09692 (Integrase; provisional), AlpA (COG3311), Ogr_Delta (pfam04606), SLATT_5 (pfam18160), RVT-UG17, FocA (COG2116)