myRT

myRT report for GCA_002083615.1_ASM208361v1

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Seq: MSXO01000048.1 Proteobacteria bacterium ST_bin11 326, whole genome shotgun sequence (32110 bp)
Overview 1 RT 1: 24005-30459 bp Neighborhood of RT #1 [24005, 30506] CsdA RVT-GII DUF1538 DUF1538 Feature: gene Location: 24005-25132 bp Ori: OQW70255.1 Feature: domain Description: CsdA Location: 24038-25109 bp Feature: domain Description: CsdA Location: 24038-251 09 bp Feature: gene Location: 25757-26407 bp Feature: gene Location: 26944-28260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27202-27892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27202-27892 bp Feature: gene Location: 28999-29730 bp Ori: OQW70257.1 Feature: domain Description: DUF1538 Location: 29062-29722 bp Feature: domain Description: DUF1 538 Location: 29062-29722 bp Feature: gene Location: 29727-30506 bp Ori: OQW70258.1 Feature: domain Description: DUF1538 Location: 29793-30459 bp Feature: domain Description: DUF1 538 Location: 29793-30459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsdA (COG0520), RVT-GII, DUF1538 (pfam07556)

Seq: MSXO01000045.1 Proteobacteria bacterium ST_bin11 279, whole genome shotgun sequence (19033 bp)
Overview 1 RT 1: 1556-19033 bp Neighborhood of RT #1 [1556, 19033] tolC PEP-CTERM RVT-UG4 recD recB recC GLOD5 RVT-GII PLN02653 Feature: gene Location: 1556-2875 bp Ori: OQW70391.1 Feature: domain Description: tolC Location: 1595-2861 bp Feature: domain Description: tolC Location: 1595-2 861 bp Feature: gene Location: 3771-4349 bp Ori: OQW70392.1 Feature: domain Description: PEP-CTERM Location: 4260-4323 bp Feature: domain Description: PEP-CTERM Location: 42 60-432 3 bp Feature: gene Location: 4517-5380 bp Ori: OQW70393.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4880-5306 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4880-5306 bp Feature: gene Location: 5719-7710 bp Ori: OQW70394.1 Feature: domain Description: recD Location: 5755-7693 bp Feature: domain Description: recD Location: 5755-7693 bp Feature: gene Location: 7707-11378 bp Ori: OQW70395.1 Feature: domain Description: recB Location: 7728-11364 bp Feature: domain Description: recB Location: 772 8-11364 bp Feature: gene Location: 11375-14860 bp Ori: OQW70396.1 Feature: domain Description: recC Location: 11408-14705 bp Feature: domain Description: recC Location: 11408-14705 bp Feature: gene Location: 15243-15629 bp Ori: OQW70397.1 Feature: domain Description: GLOD5 Location: 15252-15615 bp Feature: domain Description: GLOD5 Location: 152 52 -15615 bp Feature: gene Location: 15894-17182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16143-16806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16143-16806 bp Feature: gene Location: 18146-18706 bp Ori: OQW70398.1 Feature: domain Description: PLN02653 Location: 18311-18695 bp Feature: domain Description: PLN02 653 Location: 18311-18695 bp Feature: gene Location: 18691-19033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tolC (PRK09465), PEP-CTERM, RVT-UG4, recD (TIGR01447), recB (TIGR00609), recC (TIGR01450), GLOD5 (cd07253), RVT-GII, PLN02653 (GDP-mannose 4,6-dehydratase)