myRT

myRT report for GCA_002083975.1_ASM208397v1

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Seq: MTEO01000478.1 Desulfobulbaceae bacterium A2 Ga0073110_1478, whole genome shotgun sequence (4041 bp)
Overview 1 RT 1: 1-3463 bp Neighborhood of RT #1 [1, 3543] IstB_IS21_ATP COG4584 COG4584 RVT-GII GIIM Feature: gene Location: 1-230 bp Ori: OQX04596.1 Feature: domain Description: IstB_IS21_ATP Location: 73-136 bp Feature: domain Description: IstB_IS21 _ATP Location: 73-1 36 bp Feature: gene Location: 224-1780 bp Ori: OQX04597.1 Feature: domain Description: COG4584 Location: 335-1079 bp Feature: domain Description: COG4584 Location: 335-1 079 bp Feature: domain Description: COG4584 Location: 1169-1742 bp Feature: domain Description: COG4584 Location: 1 1 69-1 742 bp Feature: gene Location: 2179-3543 bp Ori: OQX04598.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485-3172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485-31 72 bp Feature: domain Description: GIIM Note: maturase Location: 3268-3463 bp Feature: domain Description: GIIM Note: maturase Location: 3268-3463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), COG4584 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: MTEO01000353.1 Desulfobulbaceae bacterium A2 Ga0073110_1353, whole genome shotgun sequence (11691 bp)
Overview 1 RT 1: 4980-11509 bp Neighborhood of RT #1 [4980, 11580] DUF1887 DUF1887 AAA-ATPase_like PDDEXK_9 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 4980-6104 bp Ori: OQX07112.1 Feature: domain Description: DUF1887 Location: 4983-5418 bp Feature: domain Description: DUF1887 Location: 4983-5418 bp Feature: domain Description: DUF1887 Location: 5652-6096 bp Feature: domain Description: DUF1887 Location: 5652 -6096 bp Feature: gene Location: 6340-7893 bp Ori: OQX07115.1 Feature: domain Description: AAA-ATPase_like Location: 6367-7159 bp Feature: domain Description: AAA-ATPase_like Location: 6367-7159 bp Feature: domain Description: PDDEXK_9 Location: 7597-7870 bp Feature: domain Description: PDDEXK_9 Location: 7597-7870 bp Feature: gene Location: 8684-11290 bp Ori: OQX07113.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9641-10238 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9641-102 38 bp Feature: domain Description: Cas1_I-II-III Location: 10319-11228 bp Feature: domain Description: Cas1_I-II-III Location: 10319-112 2 8 bp Feature: gene Location: 11293-11580 bp Ori: OQX07114.1 Feature: domain Description: Cas2_I_II_III Location: 11317-11509 bp Feature: domain Description: Cas2 _I_II_III Location: 11317-11509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1887 (pfam09002), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: MTEO01000394.1 Desulfobulbaceae bacterium A2 Ga0073110_1394, whole genome shotgun sequence (8457 bp)
Overview 1 RT 1: 3503-7957 bp Neighborhood of RT #1 [3503, 8031] DUF898 MPP_YvnB RVT-GII GIIM Feature: gene Location: 3503-4612 bp Ori: OQX06177.1 Feature: domain Description: DUF898 Location: 3605-4589 bp Feature: domain Description: DUF898 Location: 3 605-4589 bp Feature: gene Location: 4998-6155 bp Ori: OQX06178.1 Feature: domain Description: MPP_YvnB Location: 5133-5916 bp Feature: domain Description: MPP_YvnB Location: 513 3 -5916 bp Feature: gene Location: 6646-8031 bp Ori: OQX06179.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6979-7666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6979-7666 bp Feature: domain Description: GIIM Note: maturase Location: 7732-7957 bp Feature: domain Description: GIIM Note: maturase Location: 773 2-7957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF898 (pfam05987), MPP_YvnB (cd07399), RVT-GII, GIIM (pfam08388)