myRT

myRT report for GCA_002085645.1_ASM208564v1

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Seq: CP019884.1 Mycobacterium kansasii strain 4MK genome (6440784 bp)
Overview 1 RT 1: 1107248-1118269 bp 2 RT 2: 4207530-4212056 bp Neighborhood of RT #1 [1107248, 1118325] LanM-like Germane Gmad2 RVT-GII GIIM SSL2 PRK03381 Neighborhood of RT #2 [4207530, 4212151] Tra5 RVT-GII GIIM HTH_32 HTH_Tnp_1 Feature: gene Location: 1107248-1110406 bp Feature: domain Description: LanM-like Location: 1107776-1110401 bp Feature: domain Description: LanM-like Location: 1 1 07776-1 1 1 0401 bp Feature: gene Location: 1110856-1111698 bp Feature: domain Description: Germane Location: 1111015-1111357 bp Feature: domain Description: Germane Location: 1 1 1 1 01 5-1 1 1 1 357 bp Feature: domain Description: Gmad2 Location: 1111408-1111663 bp Feature: domain Description: Gmad2 Location: 1 1 1 1 408-1 1 1 1 663 bp Feature: gene Location: 1111916-1113280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1112258-1112882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 2258-1 1 1 2882 bp Feature: domain Description: GIIM Note: maturase Location: 1112975-1113188 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 2975-1 1 1 31 88 bp Feature: gene Location: 1114143-1115864 bp Feature: domain Description: SSL2 Location: 1114182-1115562 bp Feature: domain Description: SSL2 Location: 1 1 1 41 82-1 1 1 5562 bp Feature: gene Location: 1115878-1118325 bp Feature: domain Description: PRK03381 Location: 1115908-1118269 bp Feature: domain Description: PRK03381 Location: 1 1 1 5908-1 1 1 8269 bp Feature: gene Location: 4207530-4208258 bp Feature: gene Location: 4208512-4209120 bp Feature: domain Description: Tra5 Location: 4208527-4208971 bp Feature: domain Description: Tra5 Location: 4208527-4208971 bp Feature: gene Location: 4209228-4210676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4209546-4210233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4209546-421 0233 bp Feature: domain Description: GIIM Note: maturase Location: 4210308-4210503 bp Feature: domain Description: GIIM Note: maturase Location: 421 0308-421 0503 bp Feature: gene Location: 4211208-4211696 bp Feature: domain Description: HTH_32 Location: 4211301-4211514 bp Feature: domain Description: HTH_32 Location: 421 1 301 -421 1 51 4 bp Feature: gene Location: 4211693-4212151 bp Feature: domain Description: HTH_Tnp_1 Location: 4211801-4212056 bp Feature: domain Description: HTH_Tnp_1 Location: 421 1 801 -421 2056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LanM-like (cd04792), Germane (smart00909), Gmad2 (pfam10648), RVT-GII, GIIM (pfam08388), SSL2 (COG1061), PRK03381 (PII uridylyl-transferase; Provisional), Tra5 (COG2801), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527)