myRT

myRT report for GCA_002086675.1_ASM208667v1

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Seq: MVIF01000009.1 Mycobacterium persicum strain AFPC-000227 NODE_9_length_95225_cov_11.2032, whole genome shotgun sequence (95225 bp)
Overview 1 RT 1: 55559-62959 bp Neighborhood of RT #1 [55559, 62988] Penicillinase_R STKc_PknB_like Kelch Kelch Kelch Kelch_1 Kelch RVT-GII GIIM T7SS_ESX_EspC Feature: gene Location: 55559-55933 bp Ori: ORB56407.1 Feature: domain Description: Penicillinase_R Location: 55580-55907 bp Feature: domain Description: Penicillinase_R Location: 55580-55907 bp Feature: gene Location: 56214-59462 bp Ori: ORB56443.1 Feature: domain Description: STKc_PknB_like Location: 56292-57063 bp Feature: domain Description: STKc_PknB_like Location: 56292-57063 bp Feature: domain Description: Kelch Location: 57735-58047 bp Feature: domain Description: Kelch Location: 57735-58047 bp Feature: domain Description: Kelch Location: 58059-58470 bp Feature: domain Description: Kelch Location: 58059-58470 bp Feature: domain Description: Kelch Location: 58479-58857 bp Feature: domain Description: Kelch Location: 58479-58857 bp Feature: domain Description: Kelch_1 Location: 58926-59055 bp Feature: domain Description: Kelch_1 Location: 58926-59055 bp Feature: domain Description: Kelch Location: 59064-59454 bp Feature: domain Description: Kelch Location: 59064-59454 bp Feature: gene Location: 59865-61127 bp Ori: ORB56408.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60081-60741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60081 -60741 bp Feature: domain Description: GIIM Note: maturase Location: 60825-61053 bp Feature: domain Description: GIIM Note: maturase Location: 60825-61 053 bp Feature: gene Location: 61969-62598 bp Feature: gene Location: 62671-62988 bp Ori: ORB56410.1 Feature: domain Description: T7SS_ESX_EspC Location: 62677-62959 bp Feature: domain Description: T7SS_ESX_EspC Location: 62677-62959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Penicillinase_R (pfam03965), STKc_PknB_like (cd14014), Kelch (smart00612), Kelch_1 (pfam01344), RVT-GII, GIIM (pfam08388), T7SS_ESX_EspC (pfam10824)

Seq: MVIF01000075.1 Mycobacterium persicum strain AFPC-000227 NODE_75_length_30553_cov_10.6073, whole genome shotgun sequence (30553 bp)
Overview 1 RT 1: 22352-30553 bp Neighborhood of RT #1 [22352, 30553] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 22352-24799 bp Ori: ORB44074.1 Feature: domain Description: PRK03381 Location: 22382-24743 bp Feature: domain Description: PRK03381 Location: 2 2 382 -2 4743 bp Feature: gene Location: 24813-26534 bp Ori: ORB44075.1 Feature: domain Description: SSL2 Location: 24852-26232 bp Feature: domain Description: SSL2 Location: 2 4852 -2 62 32 bp Feature: gene Location: 27398-28762 bp Ori: ORB44081.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27740-28364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7740-2 8364 bp Feature: domain Description: GIIM Note: maturase Location: 28457-28670 bp Feature: domain Description: GIIM Note: maturase Location: 2 8457-2 8670 bp Feature: gene Location: 28980-29822 bp Ori: ORB44076.1 Feature: domain Description: Germane Location: 29139-29481 bp Feature: domain Description: Germane Location: 2 9139-2 9481 bp Feature: domain Description: Gmad2 Location: 29532-29787 bp Feature: domain Description: Gmad2 Location: 2 9532 -2 9787 bp Feature: gene Location: 30272-30553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: MVIF01000199.1 Mycobacterium persicum strain AFPC-000227 NODE_199_length_3030_cov_8.09109, whole genome shotgun sequence (3030 bp)
Overview 1 RT 1: 1-1331 bp Neighborhood of RT #1 [1, 1331] PRK06526 RVT-GII GIIM Feature: gene Location: 1-522 bp Ori: ORB32680.1 Feature: domain Description: PRK06526 Location: 73-511 bp Feature: domain Description: PRK06526 Location: 73 -511 bp Feature: gene Location: 700-990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-811 bp Feature: domain Description: GIIM Note: maturase Location: 880-991 bp Feature: domain Description: GIIM Note: maturase Location: 880-991 bp Feature: gene Location: 1149-1331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, GIIM (pfam08388)