myRT

myRT report for GCA_002086855.1_ASM208685v1

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Seq: MWKV01000001.1 Mycobacterium persicum strain 8MK PseudoContig_NC_022663.1, whole genome shotgun sequence (6126434 bp)
Overview 1 RT 1: 2504332-2514962 bp 2 RT 2: 2529934-2534987 bp 3 RT 3: 5110495-5118399 bp Neighborhood of RT #1 [2504332, 2515063] Penicillinase_R STKc_PknB_like Kelch Kelch Kelch Kelch_1 Kelch RVT-GII PRK03355 HAD-SF-IB-hyp1 PlsC valS Neighborhood of RT #2 [2529934, 2535016] DDE_Tnp_1_4 RVT-GII T7SS_ESX_EspC Neighborhood of RT #3 [5110495, 5118401] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 InsE Feature: gene Location: 2504332-2504706 bp Feature: domain Description: Penicillinase_R Location: 2504353-2504680 bp Feature: domain Description: Penicillinase_R Location: 2504353-2504680 bp Feature: gene Location: 2504987-2508235 bp Feature: domain Description: STKc_PknB_like Location: 2505065-2505836 bp Feature: domain Description: STKc_PknB_like Location: 2505065-2505836 bp Feature: domain Description: Kelch Location: 2506508-2506820 bp Feature: domain Description: Kelch Location: 2506508-2506820 bp Feature: domain Description: Kelch Location: 2506832-2507243 bp Feature: domain Description: Kelch Location: 2506832-2507243 bp Feature: domain Description: Kelch Location: 2507252-2507630 bp Feature: domain Description: Kelch Location: 2507252-2507630 bp Feature: domain Description: Kelch_1 Location: 2507699-2507828 bp Feature: domain Description: Kelch_1 Location: 2507699-2507828 bp Feature: domain Description: Kelch Location: 2507837-2508227 bp Feature: domain Description: Kelch Location: 2507837-2508227 bp Feature: gene Location: 2508637-2509900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2508853-2509456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2508853-2509456 bp Feature: gene Location: 2510898-2513288 bp Feature: domain Description: PRK03355 Location: 2510904-2513238 bp Feature: domain Description: PRK03355 Location: 251 0904-251 3238 bp Feature: gene Location: 2513285-2515063 bp Feature: domain Description: HAD-SF-IB-hyp1 Location: 2513405-2513999 bp Feature: domain Description: HAD-SF-IB-hyp1 Location: 251 3405-251 3999 bp Feature: domain Description: PlsC Location: 2514131-2514755 bp Feature: domain Description: PlsC Location: 251 41 31 -251 4755 bp Feature: domain Description: valS Location: 2514797-2514962 bp Feature: domain Description: valS Location: 251 4797-251 4962 bp Feature: gene Location: 2529934-2531316 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2529949-2531308 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 2529949-2531 308 bp Feature: gene Location: 2531376-2531753 bp Feature: gene Location: 2532312-2533155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532528-2533131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532528-25331 31 bp Feature: gene Location: 2533997-2534626 bp Feature: gene Location: 2534699-2535016 bp Feature: domain Description: T7SS_ESX_EspC Location: 2534705-2534987 bp Feature: domain Description: T7SS_ESX_EspC Location: 2534705-2534987 bp Feature: gene Location: 5110495-5112942 bp Feature: domain Description: PRK03381 Location: 5110525-5112886 bp Feature: domain Description: PRK03381 Location: 51 1 0525-51 1 2886 bp Feature: gene Location: 5112956-5114677 bp Feature: domain Description: SSL2 Location: 5112995-5114375 bp Feature: domain Description: SSL2 Location: 51 1 2995-51 1 4375 bp Feature: gene Location: 5115541-5116905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5115883-5116507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 5883-51 1 6507 bp Feature: domain Description: GIIM Note: maturase Location: 5116600-5116813 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 6600-51 1 681 3 bp Feature: gene Location: 5117123-5117965 bp Feature: domain Description: Germane Location: 5117282-5117624 bp Feature: domain Description: Germane Location: 51 1 7282-51 1 7624 bp Feature: domain Description: Gmad2 Location: 5117675-5117930 bp Feature: domain Description: Gmad2 Location: 51 1 7675-51 1 7930 bp Feature: gene Location: 5118126-5118401 bp Feature: domain Description: InsE Location: 5118138-5118399 bp Feature: domain Description: InsE Location: 51 1 81 38-51 1 8399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Penicillinase_R (pfam03965), STKc_PknB_like (cd14014), Kelch (smart00612), Kelch_1 (pfam01344), RVT-GII, PRK03355 (glycerol-3-phosphate 1-O-acyltransferase), HAD-SF-IB-hyp1 (TIGR01490), PlsC (smart00563), valS (TIGR00422), DDE_Tnp_1_4 (pfam13701)
T7SS_ESX_EspC (pfam10824), PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648), InsE (COG2963)