myRT

myRT report for GCA_002086895.1_ASM208689v1

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Seq: MWKY01000001.1 Mycobacterium kansasii strain 5MK PseudoContig, whole genome shotgun sequence (6649816 bp)
Overview 1 RT 1: 2305058-2309679 bp 2 RT 2: 5440957-5449227 bp Neighborhood of RT #1 [2305058, 2309679] HTH_Tnp_1 HTH_32 RVT-GII GIIM Tra5 Neighborhood of RT #2 [5440957, 5449227] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 2305058-2305516 bp Feature: domain Description: HTH_Tnp_1 Location: 2305166-2305421 bp Feature: domain Description: HTH_Tnp_1 Location: 23051 66-2305421 bp Feature: gene Location: 2305513-2306001 bp Feature: domain Description: HTH_32 Location: 2305606-2305819 bp Feature: domain Description: HTH_32 Location: 2305606-230581 9 bp Feature: gene Location: 2306533-2307981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2306851-2307538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2306851 -2307538 bp Feature: domain Description: GIIM Note: maturase Location: 2307613-2307808 bp Feature: domain Description: GIIM Note: maturase Location: 230761 3-2307808 bp Feature: gene Location: 2308089-2308697 bp Feature: domain Description: Tra5 Location: 2308104-2308548 bp Feature: domain Description: Tra5 Location: 23081 04-2308548 bp Feature: gene Location: 2308951-2309679 bp Feature: gene Location: 5440957-5443404 bp Feature: domain Description: PRK03381 Location: 5440987-5443348 bp Feature: domain Description: PRK03381 Location: 5440987-5443348 bp Feature: gene Location: 5443418-5445139 bp Feature: domain Description: SSL2 Location: 5443457-5444837 bp Feature: domain Description: SSL2 Location: 5443457-5444837 bp Feature: gene Location: 5446003-5447367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5446345-5446969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5446345-5446969 bp Feature: domain Description: GIIM Note: maturase Location: 5447062-5447275 bp Feature: domain Description: GIIM Note: maturase Location: 5447062-5447275 bp Feature: gene Location: 5447699-5448427 bp Feature: domain Description: Germane Location: 5447744-5448086 bp Feature: domain Description: Germane Location: 5447744-5448086 bp Feature: domain Description: Gmad2 Location: 5448137-5448392 bp Feature: domain Description: Gmad2 Location: 54481 37-5448392 bp Feature: gene Location: 5448877-5449227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), Germane (smart00909), Gmad2 (pfam10648)