myRT

myRT report for GCA_002087215.1_ASM208721v1

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Seq: MZMY01000081.1 Klebsiella pneumoniae subsp. pneumoniae strain KpvST147L_NDM Seq99, whole genome shotgun sequence (1665 bp)
Overview 1 RT 1: 60-1152 bp Neighborhood of RT #1 [60, 1544] RVT-GII Feature: gene Location: 60-1544 bp Ori: ORC47386.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1 1 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MZMY01000105.1 Klebsiella pneumoniae subsp. pneumoniae strain KpvST147L_NDM Seq127, whole genome shotgun sequence (141112 bp)
Overview 1 RT 1: 96-3156 bp Neighborhood of RT #1 [96, 3156] DinI HTH_XRE RVT-Retrons Feature: gene Location: 96-536 bp Ori: ORC44808.1 Feature: domain Description: DinI Location: 351-534 bp Feature: domain Description: DinI Location: 351-534 bp Feature: gene Location: 1157-1465 bp Ori: ORC44809.1 Feature: domain Description: HTH_XRE Location: 1169-1334 bp Feature: domain Description: HTH_XRE Location: 1169-1334 bp Feature: gene Location: 1443-2393 bp Ori: ORC44810.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1623-2166 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162 3-2 166 bp Feature: gene Location: 2532-2963 bp Feature: gene Location: 2962-3156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons

Seq: MZMY01000106.1 Klebsiella pneumoniae subsp. pneumoniae strain KpvST147L_NDM Seq128, whole genome shotgun sequence (161195 bp)
Overview 1 RT 1: 34837-43022 bp Neighborhood of RT #1 [34837, 43024] XerC RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 34837-35259 bp Ori: ORC44510.1 Feature: domain Description: XerC Location: 34915-35218 bp Feature: domain Description: XerC Location: 3 4915-3 5218 bp Feature: gene Location: 35770-36021 bp Feature: gene Location: 36154-37638 bp Ori: ORC44511.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36556-37246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6556-3 7246 bp Feature: gene Location: 37718-38137 bp Ori: ORC44512.1 Feature: domain Description: PRK10276 Location: 37721-38132 bp Feature: domain Description: PRK10276 Location: 3 7721-3 813 2 bp Feature: gene Location: 38139-39404 bp Ori: ORC44513.1 Feature: domain Description: umuC Location: 38142-39402 bp Feature: domain Description: umuC Location: 3 8142-3 9402 bp Feature: gene Location: 39629-39817 bp Feature: gene Location: 40356-40985 bp Ori: ORC44627.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 40359-40806 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 403 59-40806 bp Feature: gene Location: 41186-41854 bp Ori: ORC44515.1 Feature: domain Description: PRK09951 Location: 41189-41852 bp Feature: domain Description: PRK09951 Location: 41189-41852 bp Feature: gene Location: 42059-43024 bp Ori: ORC44516.1 Feature: domain Description: PRK15110 Location: 42062-43022 bp Feature: domain Description: PRK15110 Location: 42062-43 022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: CM007852.1 Klebsiella pneumoniae subsp. pneumoniae strain KpvST147L_NDM plasmid pKpvST147L, complete sequence, whole genome shotgun sequence (343282 bp)
Overview 1 RT 1: 164857-169356 bp 2 RT 2: 295802-299641 bp Neighborhood of RT #1 [164857, 169412] PRK10276 RVT-GII cas7_csf2 Neighborhood of RT #2 [295802, 299661] INT_Cre_C RVT-GII HHA Feature: gene Location: 164857-165279 bp Ori: ORC43990.1 Feature: domain Description: PRK10276 Location: 164863-165265 bp Feature: domain Description: PRK10276 Location: 164 863-165265 bp Feature: gene Location: 165270-165449 bp Feature: gene Location: 165365-166849 bp Ori: ORC43992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165767-166457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165767-1664 57 bp Feature: gene Location: 166907-167101 bp Feature: gene Location: 168621-169412 bp Ori: ORC43993.1 Feature: domain Description: cas7_csf2 Location: 168942-169356 bp Feature: domain Description: cas7_csf2 Location: 16894 2-169356 bp Feature: gene Location: 295802-296119 bp Feature: gene Location: 296185-297321 bp Ori: ORC44124.1 Feature: domain Description: INT_Cre_C Location: 296608-297262 bp Feature: domain Description: INT_Cre_C Location: 296608-297262 bp Feature: gene Location: 297407-298891 bp Ori: ORC44125.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297809-298499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297809-2984 99 bp Feature: gene Location: 298891-299142 bp Feature: gene Location: 299407-299661 bp Ori: ORC44127.1 Feature: domain Description: HHA Location: 299458-299641 bp Feature: domain Description: HHA Location: 2994 58-29964 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, cas7_csf2 (TIGR03115), INT_Cre_C (cd00799), HHA (pfam05321)