myRT

myRT report for GCA_002087555.1_ASM208755v1

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Seq: NCRV01000003.1 Escherichia coli strain OS_01_020_10 scaffold00003, whole genome shotgun sequence (382714 bp)
Overview 1 RT 1: 325206-329084 bp Neighborhood of RT #1 [325206, 329089] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 325206-325922 bp Ori: ORD24538.1 Feature: domain Description: rph Location: 325209-325917 bp Feature: domain Description: rph Location: 325209-32591 7 bp Feature: gene Location: 325987-326628 bp Ori: ORD24539.1 Feature: domain Description: pyrE Location: 325990-326623 bp Feature: domain Description: pyrE Location: 325990-326623 bp Feature: gene Location: 326926-327885 bp Ori: ORD24540.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 327061-327610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 327061 -32761 0 bp Feature: gene Location: 327931-328527 bp Ori: ORD24541.1 Feature: domain Description: slmA Location: 327937-328513 bp Feature: domain Description: slmA Location: 327937-32851 3 bp Feature: gene Location: 328634-329089 bp Ori: ORD24607.1 Feature: domain Description: dut Location: 328637-329084 bp Feature: domain Description: dut Location: 328637-329084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NCRV01000001.1 Escherichia coli strain OS_01_020_10 scaffold00001, whole genome shotgun sequence (2972073 bp)
Overview 1 RT 1: 2942709-2946709 bp Neighborhood of RT #1 [2942709, 2946717] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2942709-2944070 bp Ori: ORD33516.1 Feature: domain Description: DcuC Location: 2942712-2944044 bp Feature: domain Description: DcuC Location: 2 942 712 -2 944044 bp Feature: gene Location: 2944123-2944350 bp Feature: gene Location: 2944716-2945278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945022-2945124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 94502 2 -2 94512 4 bp Feature: gene Location: 2945326-2945528 bp Feature: gene Location: 2945695-2946717 bp Ori: ORD33654.1 Feature: domain Description: Asparaginase_2 Location: 2945776-2946709 bp Feature: domain Description: Asparaginase_2 Location: 2 945776-2 946709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)