myRT

myRT report for GCA_002087635.1_ASM208763v1

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Seq: NCSA01000002.1 Escherichia coli strain OS_09_001_15 scaffold00002, whole genome shotgun sequence (687194 bp)
Overview 1 RT 1: 427460-432276 bp Neighborhood of RT #1 [427460, 432368] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 427460-428638 bp Ori: ORD53463.1 Feature: domain Description: PRK09692 Location: 427469-428621 bp Feature: domain Description: PRK09692 Location: 427469-428621 bp Feature: gene Location: 428655-429296 bp Ori: ORD53684.1 Feature: domain Description: SLATT_5 Location: 428658-429264 bp Feature: domain Description: SLATT_5 Location: 428658-429264 bp Feature: gene Location: 429491-430900 bp Ori: ORD53464.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 429728-430340 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 429728-430340 bp Feature: gene Location: 431222-431794 bp Ori: ORD53465.1 Feature: domain Description: Psu Location: 431240-431777 bp Feature: domain Description: Psu Location: 431 240-431 777 bp Feature: gene Location: 431868-432368 bp Ori: ORD53466.1 Feature: domain Description: PRK09678 Location: 431871-432003 bp Feature: domain Description: PRK09678 Location: 431 871 -432003 bp Feature: domain Description: PRK09678 Location: 432126-432276 bp Feature: domain Description: PRK09678 Location: 4321 26-432276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NCSA01000001.1 Escherichia coli strain OS_09_001_15 scaffold00001, whole genome shotgun sequence (2694652 bp)
Overview 1 RT 1: 47477-52043 bp Neighborhood of RT #1 [47477, 52048] RVT-GII GIIM YhhI YhhI YhhI PRK10438 Feature: gene Location: 47477-47944 bp Feature: gene Location: 48071-48130 bp Feature: gene Location: 48572-49894 bp Ori: ORD61550.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48848-49505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48848-49505 bp Feature: domain Description: GIIM Note: maturase Location: 49595-49799 bp Feature: domain Description: GIIM Note: maturase Location: 49595-49799 bp Feature: gene Location: 50101-51237 bp Ori: ORD61551.1 Feature: domain Description: YhhI Location: 50104-50467 bp Feature: domain Description: YhhI Location: 50104-50467 bp Feature: domain Description: YhhI Location: 50524-50878 bp Feature: domain Description: YhhI Location: 5052 4-50878 bp Feature: domain Description: YhhI Location: 50893-51136 bp Feature: domain Description: YhhI Location: 50893-51136 bp Feature: gene Location: 51278-52048 bp Ori: ORD61552.1 Feature: domain Description: PRK10438 Location: 51281-52043 bp Feature: domain Description: PRK10438 Location: 512 81-52 043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK10438 (C-N hydrolase family amidase; Provisional)