myRT

myRT report for GCA_002087815.1_ASM208781v1

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Seq: NCSI01000001.1 Escherichia coli strain OS_09_001_-1.1 scaffold00001, whole genome shotgun sequence (3373058 bp)
Overview 1 RT 1: 47477-52043 bp Neighborhood of RT #1 [47477, 52048] RVT-GII GIIM YhhI YhhI YhhI PRK10438 Feature: gene Location: 47477-47944 bp Feature: gene Location: 48071-48130 bp Feature: gene Location: 48572-49894 bp Ori: ORD89569.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48848-49505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48848-49505 bp Feature: domain Description: GIIM Note: maturase Location: 49595-49799 bp Feature: domain Description: GIIM Note: maturase Location: 49595-49799 bp Feature: gene Location: 50101-51237 bp Ori: ORD89570.1 Feature: domain Description: YhhI Location: 50104-50467 bp Feature: domain Description: YhhI Location: 501 04-50467 bp Feature: domain Description: YhhI Location: 50524-50878 bp Feature: domain Description: YhhI Location: 50524-50878 bp Feature: domain Description: YhhI Location: 50893-51136 bp Feature: domain Description: YhhI Location: 50893-51 1 36 bp Feature: gene Location: 51278-52048 bp Ori: ORD89571.1 Feature: domain Description: PRK10438 Location: 51281-52043 bp Feature: domain Description: PRK1 0438 Location: 51 281 -52043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK10438 (C-N hydrolase family amidase; Provisional)

Seq: NCSI01000002.1 Escherichia coli strain OS_09_001_-1.1 scaffold00002, whole genome shotgun sequence (809740 bp)
Overview 1 RT 1: 427266-432082 bp Neighborhood of RT #1 [427266, 432174] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 427266-428444 bp Ori: ORD86684.1 Feature: domain Description: PRK09692 Location: 427275-428427 bp Feature: domain Description: PRK09692 Location: 42 72 75-42 842 7 bp Feature: gene Location: 428461-429102 bp Ori: ORD87022.1 Feature: domain Description: SLATT_5 Location: 428464-429070 bp Feature: domain Description: SLATT_5 Location: 42 8464-42 9070 bp Feature: gene Location: 429297-430706 bp Ori: ORD86685.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 429534-430146 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 42 9534-430146 bp Feature: gene Location: 431028-431600 bp Ori: ORD86686.1 Feature: domain Description: Psu Location: 431046-431583 bp Feature: domain Description: Psu Location: 431046-431583 bp Feature: gene Location: 431674-432174 bp Ori: ORD86687.1 Feature: domain Description: PRK09678 Location: 431677-431809 bp Feature: domain Description: PRK09678 Location: 431677-431809 bp Feature: domain Description: PRK09678 Location: 431932-432082 bp Feature: domain Description: PRK09678 Location: 431932 -432 082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)