myRT

myRT report for GCA_002088145.1_ASM208814v1

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Seq: MWZF01000100.1 Pseudomonas aeruginosa strain UQCCR 35166-1996 AC02 NODE_100_length_19822_cov_58.1211, whole genome shotgun sequence (19822 bp)
Overview 1 RT 1: 1-1522 bp Neighborhood of RT #1 [1, 1536] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 1-363 bp Ori: ORE30187.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 178-361 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 78-361 bp Feature: gene Location: 636-992 bp Ori: ORE30158.1 Feature: domain Description: Avd_like Location: 663-966 bp Feature: domain Description: Avd_like Location: 663-966 bp Feature: gene Location: 1030-1536 bp Ori: ORE30188.1 Feature: domain Description: DUF1566 Location: 1198-1522 bp Feature: domain Description: DUF1 566 Location: 1 1 98-1 522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: MWZF01000003.1 Pseudomonas aeruginosa strain UQCCR 35166-1996 AC02 NODE_3_length_134021_cov_37.7139, whole genome shotgun sequence (133990 bp)
Overview 1 RT 1: 108462-114727 bp Neighborhood of RT #1 [108462, 114816] DUF2958 DUF932 RVT-UG3 RVT-UG8 RadC Phage_AlpA Feature: gene Location: 108462-108830 bp Ori: ORE42833.1 Feature: domain Description: DUF2958 Location: 108510-108822 bp Feature: domain Description: DUF2 958 Location: 108510-10882 2 bp Feature: gene Location: 109100-109924 bp Ori: ORE42834.1 Feature: domain Description: DUF932 Location: 109211-109889 bp Feature: domain Description: DUF932 Location: 1092 11-109889 bp Feature: gene Location: 110534-111817 bp Ori: ORE42835.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 110837-111335 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 110837-111335 bp Feature: gene Location: 111827-113782 bp Ori: ORE42836.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 112349-112790 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 112 349-112 790 bp Feature: gene Location: 114027-114176 bp Feature: domain Description: RadC Location: 114030-114165 bp Feature: domain Description: RadC Location: 114030-114165 bp Feature: gene Location: 114454-114816 bp Ori: ORE42837.1 Feature: domain Description: Phage_AlpA Location: 114577-114727 bp Feature: domain Description: Phage_AlpA Location: 114577-11472 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2958 (pfam11171), DUF932 (pfam06067), RVT-UG3, RVT-UG8, RadC (pfam04002), Phage_AlpA (pfam05930)