myRT

myRT report for GCA_002088525.1_ASM208852v1

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Seq: NAHI01000024.1 Snodgrassella alvi strain N-W4 NODE_52, whole genome shotgun sequence (5955 bp)
Overview 1 RT 1: 147-5227 bp Neighborhood of RT #1 [147, 5227] guaA RVT-Retrons Feature: gene Location: 147-713 bp Feature: gene Location: 897-2462 bp Ori: ORF28375.1 Feature: domain Description: guaA Location: 903-2460 bp Feature: domain Description: guaA Location: 903-2460 bp Feature: gene Location: 2719-3864 bp Ori: ORF28376.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2956-3589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2956-3589 bp Feature: gene Location: 4049-5227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), RVT-Retrons

Seq: NAHI01000018.1 Snodgrassella alvi strain N-W4 NODE_58, whole genome shotgun sequence (4906 bp)
Overview 1 RT 1: 82-4077 bp Neighborhood of RT #1 [82, 4211] RVT-AbiP2 cysteine_hydrolases Peptidase_C92 Feature: gene Location: 82-1590 bp Ori: ORF28586.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 514-964 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 514-964 bp Feature: gene Location: 2665-3210 bp Ori: ORF28587.1 Feature: domain Description: cysteine_hydrolases Location: 2674-3181 bp Feature: domain Description: cysteine_hydrolases Location: 2 674-3181 bp Feature: gene Location: 3537-4211 bp Ori: ORF28588.1 Feature: domain Description: Peptidase_C92 Location: 3747-4077 bp Feature: domain Description: Peptidase_C92 Location: 3747-4077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, cysteine_hydrolases (cl00220), Peptidase_C92 (pfam05708)