myRT

myRT report for GCA_002091075.1_ASM209107v1

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Seq: NAAR01000127.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R9_3270_R1 NODE_11_length_139309_cov_0.859421_ID_21, whole genome shotgun sequence (139307 bp)
Overview 1 RT 1: 90431-94599 bp Neighborhood of RT #1 [90431, 94607] RVT-Retrons PRK10473 Feature: gene Location: 90431-90658 bp Feature: gene Location: 90721-91683 bp Feature: gene Location: 91749-92618 bp Ori: ORF97061.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91794-92379 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91 794-92379 bp Feature: gene Location: 92866-93051 bp Feature: gene Location: 93420-94607 bp Ori: ORF97016.1 Feature: domain Description: PRK10473 Location: 93423-94599 bp Feature: domain Description: PRK1 0473 Location: 93423-94599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: NAAR01000086.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R9_3270_R1 NODE_28_length_68292_cov_0.7576_ID_55, whole genome shotgun sequence (68292 bp)
Overview 1 RT 1: 59296-65421 bp Neighborhood of RT #1 [59296, 65603] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 59296-61278 bp Ori: ORG01060.1 Feature: domain Description: PRK05658 Location: 59434-61276 bp Feature: domain Description: PRK05658 Location: 59434-612 76 bp Feature: gene Location: 61402-61908 bp Ori: ORG01061.1 Feature: domain Description: PRK10201 Location: 61405-61903 bp Feature: domain Description: PRK102 01 Location: 61405-61903 bp Feature: gene Location: 62232-62858 bp Ori: ORG01062.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 62235-62670 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 62 2 35-62 670 bp Feature: gene Location: 62966-63151 bp Feature: gene Location: 63903-65603 bp Ori: ORG01069.1 Feature: domain Description: 5 Location: 65127-65421 bp Feature: domain Description: 5 Location: 6512 7-6542 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)