myRT

myRT report for GCA_002091285.1_ASM209128v1

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Seq: NAAS01000077.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R9_3269_R1 NODE_18_length_81425_cov_1.06089_ID_35, whole genome shotgun sequence (81425 bp)
Overview 1 RT 1: 44599-48775 bp Neighborhood of RT #1 [44599, 48775] PRK10473 RVT-Retrons Feature: gene Location: 44599-45786 bp Ori: ORG14555.1 Feature: domain Description: PRK10473 Location: 44602-45778 bp Feature: domain Description: PRK1 0473 Location: 44602-45778 bp Feature: gene Location: 46131-46340 bp Feature: gene Location: 46588-47457 bp Ori: ORG14586.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46633-47218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46633-4721 8 bp Feature: gene Location: 47523-48485 bp Feature: gene Location: 48548-48775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: NAAS01000066.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R9_3269_R1 NODE_83_length_2036_cov_1.10428_ID_165, whole genome shotgun sequence (2036 bp)
Overview 1 RT 1: 3-1680 bp Neighborhood of RT #1 [3, 1868] RVT-UG11 Feature: gene Location: 3-197 bp Feature: gene Location: 949-1134 bp Feature: gene Location: 1242-1868 bp Ori: ORG15778.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1245-1680 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 12 45-1680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: NAAS01000128.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R9_3269_R1 NODE_67_length_4247_cov_378.92_ID_133, whole genome shotgun sequence (3980 bp)
Overview 1 RT 1: 716-3543 bp Neighborhood of RT #1 [716, 3548] PRK13877 YjbI RVT-Retrons CspC Feature: gene Location: 716-1039 bp Ori: ORG07772.1 Feature: domain Description: PRK13877 Location: 740-980 bp Feature: domain Description: PRK13 877 Location: 740-980 bp Feature: gene Location: 1289-1627 bp Ori: ORG07773.1 Feature: domain Description: YjbI Location: 1331-1553 bp Feature: domain Description: YjbI Location: 13 3 1-1553 bp Feature: gene Location: 2201-3340 bp Ori: ORG07774.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2345-2900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 45-2900 bp Feature: gene Location: 3345-3548 bp Ori: ORG07775.1 Feature: domain Description: CspC Location: 3348-3543 bp Feature: domain Description: CspC Location: 3 3 48-3 543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13877 (conjugal transfer transcriptional regulator TraJ), YjbI (COG2346), RVT-Retrons, CspC (COG1278)