myRT

myRT report for GCA_002091795.1_ASM209179v1

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Seq: BDAK01000024.1 Pseudomonas synxantha NBRC 3913 DNA, contig: PSY01S_CON0023_0001, whole genome shotgun sequence (99249 bp)
Overview 1 RT 1: 28110-33361 bp Neighborhood of RT #1 [28110, 33381] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 28110-28445 bp Feature: domain Description: TnpB_IS66 Location: 28128-28416 bp Feature: domain Description: TnpB_IS66 Location: 281 28-2841 6 bp Feature: gene Location: 28507-29835 bp Feature: domain Description: LZ_Tnp_IS66 Location: 28639-28846 bp Feature: domain Description: LZ_Tnp_IS66 Location: 28639-28846 bp Feature: domain Description: zf-IS66 Location: 28885-28999 bp Feature: domain Description: zf-IS66 Location: 28885-28999 bp Feature: domain Description: DDE_Tnp_IS66 Location: 29041-29815 bp Feature: domain Description: DDE_Tnp_IS66 Location: 29041 -2981 5 bp Feature: gene Location: 30393-32054 bp Feature: domain Description: RVT_N Location: 30438-30681 bp Feature: domain Description: RVT_N Location: 30438-30681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30726-31362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30726-31 362 bp Feature: domain Description: GIIM Note: maturase Location: 31419-31647 bp Feature: domain Description: GIIM Note: maturase Location: 31 41 9-31 647 bp Feature: gene Location: 32246-32380 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32252-32363 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32252-32363 bp Feature: gene Location: 32419-33381 bp Feature: domain Description: ACR3 Location: 32434-33361 bp Feature: domain Description: ACR3 Location: 32434-33361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)

Seq: BDAK01000029.1 Pseudomonas synxantha NBRC 3913 DNA, contig: PSY01S_CON0028_0001, whole genome shotgun sequence (79102 bp)
Overview 1 RT 1: 63731-69267 bp Neighborhood of RT #1 [63731, 69267] Acetyltransf_7 Acetyltransf_3 RVT-UG8 RVT-UG3 Feature: gene Location: 63731-64213 bp Feature: domain Description: Acetyltransf_7 Location: 63920-64142 bp Feature: domain Description: Acetyltransf_7 Location: 6392 0-64142 bp Feature: gene Location: 64335-64850 bp Feature: domain Description: Acetyltransf_3 Location: 64377-64782 bp Feature: domain Description: Acetyltransf_3 Location: 64377-64782 bp Feature: gene Location: 65110-67158 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 65731-66178 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 65731-66178 bp Feature: gene Location: 67151-68299 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 67406-67880 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 67406-67880 bp Feature: gene Location: 68716-68865 bp Feature: gene Location: 68869-69267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_7 (pfam13508), Acetyltransf_3 (pfam13302), RVT-UG8, RVT-UG3