myRT

myRT report for GCA_002093155.1_ASM209315v1

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Seq: MLQU01000063.1 Klebsiella pneumoniae strain Kleb_Syr NODE_18_length_76821_cov_67.6362_ID_35, whole genome shotgun sequence (76821 bp)
Overview 1 RT 1: 60908-65435 bp Neighborhood of RT #1 [60908, 65440] RVT-GII PRK10276 umuC Feature: gene Location: 60908-61123 bp Feature: gene Location: 61390-61620 bp Feature: gene Location: 61854-63341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62259-62949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62259-62949 bp Feature: gene Location: 63366-64169 bp Feature: domain Description: PRK10276 Location: 63747-64155 bp Feature: domain Description: PRK1 0276 Location: 63747-641 55 bp Feature: gene Location: 64169-65440 bp Feature: domain Description: umuC Location: 64172-65435 bp Feature: domain Description: umuC Location: 641 72-65435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: MLQU01000075.1 Klebsiella pneumoniae strain Kleb_Syr NODE_37_length_10620_cov_80.4269_ID_73, whole genome shotgun sequence (10620 bp)
Overview 1 RT 1: 5357-9728 bp Neighborhood of RT #1 [5357, 9844] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5357-5659 bp Feature: domain Description: InsE Location: 5366-5648 bp Feature: domain Description: InsE Location: 5366-5648 bp Feature: gene Location: 5686-6111 bp Feature: domain Description: PHA02517 Location: 5710-6046 bp Feature: domain Description: PHA02 517 Location: 5710-6046 bp Feature: gene Location: 6703-8226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6976-7708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6976-7708 bp Feature: domain Description: GIIM Note: maturase Location: 7783-7981 bp Feature: domain Description: GIIM Note: maturase Location: 7783-7981 bp Feature: gene Location: 8391-8549 bp Feature: domain Description: PHA02517 Location: 8394-8514 bp Feature: domain Description: PHA02 517 Location: 8394-8514 bp Feature: gene Location: 8768-9844 bp Feature: domain Description: COG3547 Location: 8807-9728 bp Feature: domain Description: COG3547 Location: 8807-972 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MLQU01000062.1 Klebsiella pneumoniae strain Kleb_Syr NODE_82_length_1236_cov_10.3204_ID_163, whole genome shotgun sequence (1236 bp)
Overview 1 RT 1: 2-1232 bp Neighborhood of RT #1 [2, 1234] RVP RVT-Retrons RVT_thumb Feature: gene Location: 2-1234 bp Feature: domain Description: RVP Location: 152-425 bp Feature: domain Description: RVP Location: 152-425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 809-1097 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 809-1097 bp Feature: domain Description: RVT_thumb Location: 1157-1232 bp Feature: domain Description: RVT_thumb Location: 1157-123 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVP (pfam00077), RVT-Retrons, RVT_thumb (pfam06817)

Seq: MLQU01000030.1 Klebsiella pneumoniae strain Kleb_Syr NODE_8_length_250799_cov_28.5765_ID_15, whole genome shotgun sequence (250799 bp)
Overview 1 RT 1: 99792-106636 bp Neighborhood of RT #1 [99792, 106893] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 99792-100097 bp Feature: gene Location: 100980-103256 bp Feature: domain Description: AAA_15 Location: 101013-102021 bp Feature: domain Description: AAA_15 Location: 101013-102021 bp Feature: gene Location: 103371-104471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103554-104082 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103554 -104 082 bp Feature: gene Location: 105127-105996 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 105649-105820 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 10564 9-105820 bp Feature: gene Location: 106417-106893 bp Feature: domain Description: HTH_23 Location: 106495-106636 bp Feature: domain Description: HTH_23 Location: 1064 95-106636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)