myRT

myRT report for GCA_002099435.1_ASM209943v1

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Seq: NAFN01000094.1 Escherichia coli strain KCJK1916 NODE_32_length_11449_cov_20.9507_ID_63, whole genome shotgun sequence (11449 bp)
Overview 1 RT 1: 4621-10643 bp Neighborhood of RT #1 [4621, 10669] PRK13746 efflux_Bcr_CflA RVT-GII GIIM PRK13746 DHFR_1 Feature: gene Location: 4621-5412 bp Ori: ORS61711.1 Feature: domain Description: PRK13746 Location: 4624-5404 bp Feature: domain Description: PRK1 3746 Location: 4624-5404 bp Feature: gene Location: 5505-6764 bp Ori: ORS61712.1 Feature: domain Description: efflux_Bcr_CflA Location: 5538-6681 bp Feature: domain Description: efflux_Bcr_CflA Location: 5538-6681 bp Feature: gene Location: 7535-8884 bp Ori: ORS61713.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7817-8435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781 7-8435 bp Feature: domain Description: GIIM Note: maturase Location: 8483-8687 bp Feature: domain Description: GIIM Note: maturase Location: 8483-8687 bp Feature: gene Location: 8973-9764 bp Ori: ORS61714.1 Feature: domain Description: PRK13746 Location: 8976-9756 bp Feature: domain Description: PRK1 3746 Location: 8976-9756 bp Feature: gene Location: 10172-10669 bp Ori: ORS61715.1 Feature: domain Description: DHFR_1 Location: 10196-10643 bp Feature: domain Description: DHFR_1 Location: 1 01 96-1 0643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13746 (aminoglycoside resistance protein; Provisional), efflux_Bcr_CflA (TIGR00710), RVT-GII, GIIM (pfam08388), DHFR_1 (pfam00186)

Seq: NAFN01000008.1 Escherichia coli strain KCJK1916 NODE_1_length_738659_cov_16.9459_ID_1, whole genome shotgun sequence (738659 bp)
Overview 1 RT 1: 221822-229632 bp Neighborhood of RT #1 [221822, 229637] Phage_GPA RVT-AbiP2 RVT-Retrons Q Feature: gene Location: 221822-224098 bp Ori: ORS71714.1 Feature: domain Description: Phage_GPA Location: 222221-223208 bp Feature: domain Description: Phage_GPA Location: 2 2 2 2 2 1-2 2 32 08 bp Feature: gene Location: 224202-224420 bp Feature: gene Location: 224586-226130 bp Ori: ORS71715.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 225003-225456 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 5003-2 2 5456 bp Feature: gene Location: 226645-227871 bp Ori: ORS71716.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226831-227413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6831-2 2 7413 bp Feature: gene Location: 227868-228575 bp Feature: gene Location: 228618-229637 bp Ori: ORS71718.1 Feature: domain Description: Q Location: 228621-229632 bp Feature: domain Description: Q Location: 2 2 862 1-2 2 9632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536)