myRT

myRT report for GCA_002099455.1_ASM209945v1

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Seq: NAFO01000101.1 Escherichia coli strain KCJK1925 NODE_34_length_11449_cov_17.9641_ID_67, whole genome shotgun sequence (11449 bp)
Overview 1 RT 1: 781-6821 bp Neighborhood of RT #1 [781, 6829] DHFR_1 PRK13746 RVT-GII GIIM efflux_Bcr_CflA PRK13746 Feature: gene Location: 781-1278 bp Ori: ORS67092.1 Feature: domain Description: DHFR_1 Location: 805-1252 bp Feature: domain Description: DHFR_1 Location: 805-1 252 bp Feature: gene Location: 1686-2477 bp Ori: ORS67093.1 Feature: domain Description: PRK13746 Location: 1689-2469 bp Feature: domain Description: PRK1 3746 Location: 1 689-2469 bp Feature: gene Location: 2566-3915 bp Ori: ORS67094.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2848-3466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2848-3466 bp Feature: domain Description: GIIM Note: maturase Location: 3514-3718 bp Feature: domain Description: GIIM Note: maturase Location: 351 4-371 8 bp Feature: gene Location: 4686-5945 bp Ori: ORS67095.1 Feature: domain Description: efflux_Bcr_CflA Location: 4719-5862 bp Feature: domain Description: efflux_Bcr_CflA Location: 471 9-5862 bp Feature: gene Location: 6038-6829 bp Ori: ORS67096.1 Feature: domain Description: PRK13746 Location: 6041-6821 bp Feature: domain Description: PRK1 3746 Location: 6041 -6821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHFR_1 (pfam00186), PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), efflux_Bcr_CflA (TIGR00710)

Seq: NAFO01000008.1 Escherichia coli strain KCJK1925 NODE_1_length_738694_cov_27.3286_ID_1, whole genome shotgun sequence (738694 bp)
Overview 1 RT 1: 221857-229667 bp Neighborhood of RT #1 [221857, 229672] Phage_GPA RVT-AbiP2 RVT-Retrons Q Feature: gene Location: 221857-224133 bp Ori: ORS79030.1 Feature: domain Description: Phage_GPA Location: 222256-223243 bp Feature: domain Description: Phage_GPA Location: 2 2 2 2 56-2 2 32 43 bp Feature: gene Location: 224237-224455 bp Feature: gene Location: 224621-226165 bp Ori: ORS79031.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 225038-225491 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 5038-2 2 5491 bp Feature: gene Location: 226680-227906 bp Ori: ORS79032.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226866-227448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6866-2 2 7448 bp Feature: gene Location: 227903-228610 bp Feature: gene Location: 228653-229672 bp Ori: ORS79034.1 Feature: domain Description: Q Location: 228656-229667 bp Feature: domain Description: Q Location: 2 2 8656-2 2 9667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536)