myRT

myRT report for GCA_002099865.1_ASM209986v1

Download annotations/find similar RTs

Seq: NAEG01000098.1 Escherichia coli strain KCJK5682 NODE_44_length_22098_cov_29.6967_ID_87, whole genome shotgun sequence (22098 bp)
Overview 1 RT 1: 9043-12517 bp Neighborhood of RT #1 [9043, 12534] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 9043-9351 bp Feature: domain Description: Rep_3 Location: 9049-9313 bp Feature: domain Description: Rep_3 Location: 9049-931 3 bp Feature: gene Location: 9361-10058 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9367-9469 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9367-9469 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9490-9622 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9490-9622 bp Feature: gene Location: 10210-11694 bp Ori: ORS14490.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10612-11302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 061 2-1 1 302 bp Feature: gene Location: 11694-11945 bp Feature: gene Location: 12103-12534 bp Ori: ORS14492.1 Feature: domain Description: PRK10276 Location: 12154-12517 bp Feature: domain Description: PRK1 0276 Location: 1 21 54-1 251 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NAEG01000002.1 Escherichia coli strain KCJK5682 NODE_46_length_19857_cov_24.6942_ID_91, whole genome shotgun sequence (19857 bp)
Overview 1 RT 1: 17510-19856 bp Neighborhood of RT #1 [17510, 19857] YeeP RVT-GII InsE Zn_Tnp_IS1 Feature: gene Location: 17510-18385 bp Ori: ORS27108.1 Feature: domain Description: YeeP Location: 17525-18383 bp Feature: domain Description: YeeP Location: 1752 5-18383 bp Feature: gene Location: 18611-18853 bp Feature: gene Location: 18813-19125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: gene Location: 19393-19731 bp Ori: ORS27109.1 Feature: domain Description: InsE Location: 19405-19678 bp Feature: domain Description: InsE Location: 19405-19678 bp Feature: gene Location: 19787-19857 bp Ori: ORS27110.1 Feature: domain Description: Zn_Tnp_IS1 Location: 19793-19856 bp Feature: domain Description: Zn_Tnp_IS1 Location: 19793-19856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, InsE (COG2963), Zn_Tnp_IS1 (pfam03811)

Seq: NAEG01000019.1 Escherichia coli strain KCJK5682 NODE_25_length_73215_cov_21.6371_ID_49, whole genome shotgun sequence (73215 bp)
Overview 1 RT 1: 37853-41303 bp Neighborhood of RT #1 [37853, 41303] PRK01271 YhhI YhhI RVT-GII GIIM Feature: gene Location: 37853-38080 bp Ori: ORS24203.1 Feature: domain Description: PRK01271 Location: 37856-38078 bp Feature: domain Description: PRK01271 Location: 3 7856-3 8078 bp Feature: gene Location: 38131-38904 bp Feature: domain Description: YhhI Location: 38134-38497 bp Feature: domain Description: YhhI Location: 3 813 4-3 8497 bp Feature: domain Description: YhhI Location: 38554-38905 bp Feature: domain Description: YhhI Location: 3 8554-3 8905 bp Feature: gene Location: 39111-40433 bp Ori: ORS24204.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39387-40044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 93 87-40044 bp Feature: domain Description: GIIM Note: maturase Location: 40128-40338 bp Feature: domain Description: GIIM Note: maturase Location: 40128-403 3 8 bp Feature: gene Location: 40433-40641 bp Feature: gene Location: 40959-41303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01271 (tautomerase PptA), YhhI (COG5433), RVT-GII, GIIM (pfam08388)