myRT

myRT report for GCA_002099895.1_ASM209989v1

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Seq: NAEH01000063.1 Escherichia coli strain KCJK5683 NODE_44_length_21987_cov_19.9018_ID_87, whole genome shotgun sequence (21987 bp)
Overview 1 RT 1: 8932-12406 bp Neighborhood of RT #1 [8932, 12423] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 8932-9240 bp Feature: domain Description: Rep_3 Location: 8938-9202 bp Feature: domain Description: Rep_3 Location: 8938-9202 bp Feature: gene Location: 9250-9947 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9256-9358 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9256-9358 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9379-9511 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9379-951 1 bp Feature: gene Location: 10099-11583 bp Ori: ORS15800.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10501-11191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0501 -1 1 1 91 bp Feature: gene Location: 11583-11834 bp Feature: gene Location: 11992-12423 bp Ori: ORS15802.1 Feature: domain Description: PRK10276 Location: 12043-12406 bp Feature: domain Description: PRK1 0276 Location: 1 2043-1 2406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NAEH01000003.1 Escherichia coli strain KCJK5683 NODE_46_length_20498_cov_26.2877_ID_91, whole genome shotgun sequence (20498 bp)
Overview 1 RT 1: 17510-20057 bp Neighborhood of RT #1 [17510, 20484] YeeP RVT-GII InsE InsA Feature: gene Location: 17510-18385 bp Ori: ORS27699.1 Feature: domain Description: YeeP Location: 17525-18383 bp Feature: domain Description: YeeP Location: 1752 5-18383 bp Feature: gene Location: 18611-18853 bp Feature: gene Location: 18813-19125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: gene Location: 19393-19731 bp Ori: ORS27700.1 Feature: domain Description: InsE Location: 19405-19678 bp Feature: domain Description: InsE Location: 19405-19678 bp Feature: gene Location: 19787-20484 bp Feature: domain Description: InsA Location: 19793-20057 bp Feature: domain Description: InsA Location: 19793-2 0057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, InsE (COG2963), InsA (COG3677)

Seq: NAEH01000020.1 Escherichia coli strain KCJK5683 NODE_26_length_73215_cov_21.1587_ID_51, whole genome shotgun sequence (73215 bp)
Overview 1 RT 1: 37853-41303 bp Neighborhood of RT #1 [37853, 41303] PRK01271 YhhI YhhI RVT-GII GIIM Feature: gene Location: 37853-38080 bp Ori: ORS25812.1 Feature: domain Description: PRK01271 Location: 37856-38078 bp Feature: domain Description: PRK01271 Location: 3 7856-3 8078 bp Feature: gene Location: 38131-38904 bp Feature: domain Description: YhhI Location: 38134-38497 bp Feature: domain Description: YhhI Location: 3 813 4-3 8497 bp Feature: domain Description: YhhI Location: 38554-38905 bp Feature: domain Description: YhhI Location: 3 8554-3 8905 bp Feature: gene Location: 39111-40433 bp Ori: ORS25813.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39387-40044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 93 87-40044 bp Feature: domain Description: GIIM Note: maturase Location: 40128-40338 bp Feature: domain Description: GIIM Note: maturase Location: 40128-403 3 8 bp Feature: gene Location: 40433-40641 bp Feature: gene Location: 40959-41303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01271 (tautomerase PptA), YhhI (COG5433), RVT-GII, GIIM (pfam08388)