myRT

myRT report for GCA_002099975.1_ASM209997v1

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Seq: NAEB01000020.1 Escherichia coli strain KCJK5674 NODE_25_length_72693_cov_35.0607_ID_49, whole genome shotgun sequence (72693 bp)
Overview 1 RT 1: 37331-40781 bp Neighborhood of RT #1 [37331, 40781] PRK01271 YhhI YhhI RVT-GII GIIM Feature: gene Location: 37331-37558 bp Ori: ORR98081.1 Feature: domain Description: PRK01271 Location: 37334-37556 bp Feature: domain Description: PRK01 271 Location: 37334-37556 bp Feature: gene Location: 37609-38382 bp Feature: domain Description: YhhI Location: 37612-37975 bp Feature: domain Description: YhhI Location: 3761 2-37975 bp Feature: domain Description: YhhI Location: 38032-38383 bp Feature: domain Description: YhhI Location: 38032-38383 bp Feature: gene Location: 38589-39911 bp Ori: ORR98082.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38865-39522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38865-39522 bp Feature: domain Description: GIIM Note: maturase Location: 39606-39816 bp Feature: domain Description: GIIM Note: maturase Location: 39606-3981 6 bp Feature: gene Location: 39911-40119 bp Feature: gene Location: 40437-40781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01271 (tautomerase PptA), YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: NAEB01000081.1 Escherichia coli strain KCJK5674 NODE_44_length_21876_cov_34.517_ID_87, whole genome shotgun sequence (21876 bp)
Overview 1 RT 1: 8821-12295 bp Neighborhood of RT #1 [8821, 12312] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 8821-9129 bp Feature: domain Description: Rep_3 Location: 8827-9091 bp Feature: domain Description: Rep_3 Location: 882 7-9091 bp Feature: gene Location: 9139-9836 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9145-9247 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9145-92 47 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9268-9400 bp Feature: domain Description: HTH_Tnp_IS1 Location: 92 68-9400 bp Feature: gene Location: 9988-11472 bp Ori: ORR87938.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10390-11080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10390-11080 bp Feature: gene Location: 11472-11723 bp Feature: gene Location: 11881-12312 bp Ori: ORR87940.1 Feature: domain Description: PRK10276 Location: 11932-12295 bp Feature: domain Description: PRK102 76 Location: 11932 -12 2 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NAEB01000002.1 Escherichia coli strain KCJK5674 NODE_45_length_19857_cov_38.3821_ID_89, whole genome shotgun sequence (19857 bp)
Overview 1 RT 1: 17510-19856 bp Neighborhood of RT #1 [17510, 19857] YeeP RVT-GII InsE Zn_Tnp_IS1 Feature: gene Location: 17510-18385 bp Ori: ORS00567.1 Feature: domain Description: YeeP Location: 17525-18383 bp Feature: domain Description: YeeP Location: 17525-183 83 bp Feature: gene Location: 18611-18853 bp Feature: gene Location: 18813-19125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18819-18909 bp Feature: gene Location: 19393-19731 bp Ori: ORS00568.1 Feature: domain Description: InsE Location: 19405-19678 bp Feature: domain Description: InsE Location: 19405-19678 bp Feature: gene Location: 19787-19857 bp Ori: ORS00570.1 Feature: domain Description: Zn_Tnp_IS1 Location: 19793-19856 bp Feature: domain Description: Zn_Tnp_IS1 Location: 19793 -19856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, InsE (COG2963), Zn_Tnp_IS1 (pfam03811)