myRT

myRT report for GCA_002100055.1_ASM210005v1

Download annotations/find similar RTs

Seq: NAEL01000057.1 Escherichia coli strain KCJK1478 NODE_23_length_91830_cov_7.29477_ID_45, whole genome shotgun sequence (91830 bp)
Overview 1 RT 1: 29804-33683 bp Neighborhood of RT #1 [29804, 33688] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 29804-30259 bp Feature: domain Description: dut Location: 29807-30254 bp Feature: domain Description: dut Location: 29807-30254 bp Feature: gene Location: 30366-30962 bp Feature: domain Description: slmA Location: 30372-30948 bp Feature: domain Description: slmA Location: 30372-30948 bp Feature: gene Location: 31008-31967 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31143-31692 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 1 43-31 692 bp Feature: gene Location: 32265-32906 bp Feature: domain Description: pyrE Location: 32268-32901 bp Feature: domain Description: pyrE Location: 32268-32901 bp Feature: gene Location: 32972-33688 bp Feature: domain Description: rph Location: 32975-33683 bp Feature: domain Description: rph Location: 32975-33683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NAEL01000052.1 Escherichia coli strain KCJK1478 NODE_25_length_82514_cov_7.2655_ID_49, whole genome shotgun sequence (82514 bp)
Overview 1 RT 1: 1-3170 bp Neighborhood of RT #1 [1, 3187] RVT-Retrons Phage_GPA DUF5405 Feature: gene Location: 1-325 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118-322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118-32 2 bp Feature: gene Location: 652-2922 bp Feature: domain Description: Phage_GPA Location: 1051-2038 bp Feature: domain Description: Phage_GPA Location: 1051-2 038 bp Feature: gene Location: 2912-3187 bp Feature: domain Description: DUF5405 Location: 2930-3170 bp Feature: domain Description: DUF5405 Location: 2 930-3170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NAEL01000109.1 Escherichia coli strain KCJK1478 NODE_64_length_5673_cov_7.30166_ID_127, whole genome shotgun sequence (5673 bp)
Overview 1 RT 1: 217-3344 bp Neighborhood of RT #1 [217, 3370] RVT-GII DcuC Feature: gene Location: 217-419 bp Feature: gene Location: 467-1375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773 -13 70 bp Feature: gene Location: 1729-1956 bp Feature: gene Location: 2009-3370 bp Feature: domain Description: DcuC Location: 2012-3344 bp Feature: domain Description: DcuC Location: 2012-3 3 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII