myRT

myRT report for GCA_002100165.1_ASM210016v1

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Seq: MRLJ01000066.1 Francisella tularensis subsp. holarctica strain F0608 F0608_66, whole genome shotgun sequence (35778 bp)
Overview 1 RT 1: 31674-35591 bp Neighborhood of RT #1 [31674, 35755] rlmL KOG0539 RVT-Retrons Feature: gene Location: 31674-33827 bp Ori: ORU85468.1 Feature: domain Description: rlmL Location: 31686-33822 bp Feature: domain Description: rlmL Location: 31 686-33822 bp Feature: gene Location: 33902-34456 bp Ori: ORU85469.1 Feature: domain Description: KOG0539 Location: 33974-34451 bp Feature: domain Description: KOG0539 Location: 33974-34451 bp Feature: gene Location: 35261-35755 bp Ori: ORU85471.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35279-35591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35279-35591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons

Seq: MRLJ01000131.1 Francisella tularensis subsp. holarctica strain F0608 F0608_131, whole genome shotgun sequence (45130 bp)
Overview 1 RT 1: 28031-31551 bp Neighborhood of RT #1 [28031, 31551] SufE DsbB RVT-UG4 Feature: gene Location: 28031-28345 bp Ori: ORU84725.1 Feature: domain Description: SufE Location: 28070-28343 bp Feature: domain Description: SufE Location: 2 8070-2 8343 bp Feature: gene Location: 29052-29588 bp Ori: ORU84726.1 Feature: domain Description: DsbB Location: 29085-29535 bp Feature: domain Description: DsbB Location: 2 9085-2 9535 bp Feature: gene Location: 29900-30127 bp Ori: ORU84727.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 29966-30071 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 9966-30071 bp Feature: gene Location: 30890-31303 bp Feature: gene Location: 31354-31551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRLJ01000019.1 Francisella tularensis subsp. holarctica strain F0608 F0608_19, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 1333-5643 bp Neighborhood of RT #1 [1333, 5660] RVT-UG4 DUF2797 Feature: gene Location: 1333-1558 bp Feature: gene Location: 1895-4166 bp Feature: gene Location: 4172-4604 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-4358 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-43 58 bp Feature: gene Location: 4845-5660 bp Ori: ORU86025.1 Feature: domain Description: DUF2797 Location: 4947-5643 bp Feature: domain Description: DUF2797 Location: 4947-5643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)