myRT

myRT report for GCA_002100175.1_ASM210017v1

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Seq: MRLK01000049.1 Francisella tularensis subsp. holarctica strain F0295 F0295_49, whole genome shotgun sequence (45986 bp)
Overview 1 RT 1: 13915-17514 bp Neighborhood of RT #1 [13915, 17537] RVT-UG4 DsbB SufE Feature: gene Location: 13915-14112 bp Feature: gene Location: 14163-14576 bp Feature: gene Location: 15339-15566 bp Ori: ORU87182.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15405-15510 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 5405-1 551 0 bp Feature: gene Location: 15878-16414 bp Ori: ORU87183.1 Feature: domain Description: DsbB Location: 15911-16361 bp Feature: domain Description: DsbB Location: 1 591 1 -1 6361 bp Feature: gene Location: 17121-17537 bp Ori: ORU87184.1 Feature: domain Description: SufE Location: 17160-17514 bp Feature: domain Description: SufE Location: 1 71 60-1 751 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)

Seq: MRLK01000090.1 Francisella tularensis subsp. holarctica strain F0295 F0295_90, whole genome shotgun sequence (7326 bp)
Overview 1 RT 1: 2232-7280 bp Neighborhood of RT #1 [2232, 7315] RVT-UG4 DUF2797 COG3415 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-52 57 bp Feature: gene Location: 5744-6559 bp Ori: ORU86496.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2 797 Location: 5846-6542 bp Feature: gene Location: 6935-7315 bp Ori: ORU86497.1 Feature: domain Description: COG3415 Location: 6947-7280 bp Feature: domain Description: COG3415 Location: 6947-72 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977), COG3415 (Transposase )

Seq: MRLK01000027.1 Francisella tularensis subsp. holarctica strain F0295 F0295_27, whole genome shotgun sequence (36544 bp)
Overview 1 RT 1: 31996-36544 bp Neighborhood of RT #1 [31996, 36544] rlmL KOG0539 RVT-Retrons Feature: gene Location: 31996-34149 bp Ori: ORU87545.1 Feature: domain Description: rlmL Location: 32008-34144 bp Feature: domain Description: rlmL Location: 3 2008-3 4144 bp Feature: gene Location: 34224-34778 bp Ori: ORU87546.1 Feature: domain Description: KOG0539 Location: 34296-34773 bp Feature: domain Description: KOG053 9 Location: 3 4296-3 4773 bp Feature: gene Location: 35744-36238 bp Ori: ORU87547.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35762-36074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 5762-3 6074 bp Feature: gene Location: 36210-36544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons