myRT

myRT report for GCA_002100185.1_ASM210018v1

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Seq: MRLE01000046.1 Francisella tularensis subsp. holarctica strain F0781 F0781_46, whole genome shotgun sequence (13994 bp)
Overview 1 RT 1: 8945-13981 bp Neighborhood of RT #1 [8945, 13994] RVT-UG4 DUF2797 COG3415 Feature: gene Location: 8945-9170 bp Feature: gene Location: 9507-11778 bp Feature: gene Location: 11784-12216 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11790-11970 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 790-1 1 970 bp Feature: gene Location: 12457-13272 bp Ori: ORU74821.1 Feature: domain Description: DUF2797 Location: 12559-13255 bp Feature: domain Description: DUF2797 Location: 1 2559-1 3255 bp Feature: gene Location: 13648-13994 bp Ori: ORU74822.1 Feature: domain Description: COG3415 Location: 13660-13981 bp Feature: domain Description: COG341 5 Location: 1 3660-1 3981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977), COG3415 (Transposase )

Seq: MRLE01000092.1 Francisella tularensis subsp. holarctica strain F0781 F0781_92, whole genome shotgun sequence (18035 bp)
Overview 1 RT 1: 13751-17829 bp Neighborhood of RT #1 [13751, 17993] rlmL KOG0539 RVT-Retrons Feature: gene Location: 13751-15904 bp Ori: ORU73237.1 Feature: domain Description: rlmL Location: 13763-15899 bp Feature: domain Description: rlmL Location: 13763-15899 bp Feature: gene Location: 15979-16533 bp Ori: ORU73238.1 Feature: domain Description: KOG0539 Location: 16051-16528 bp Feature: domain Description: KOG0539 Location: 16051-1652 8 bp Feature: gene Location: 17499-17993 bp Ori: ORU73240.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17517-17829 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17517-1782 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons

Seq: MRLE01000090.1 Francisella tularensis subsp. holarctica strain F0781 F0781_90, whole genome shotgun sequence (45249 bp)
Overview 1 RT 1: 13581-17180 bp Neighborhood of RT #1 [13581, 17203] RVT-UG4 DsbB SufE Feature: gene Location: 13581-13778 bp Feature: gene Location: 13829-14242 bp Feature: gene Location: 15005-15232 bp Ori: ORU73359.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15071-15176 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15071-15176 bp Feature: gene Location: 15544-16080 bp Ori: ORU73360.1 Feature: domain Description: DsbB Location: 15577-16027 bp Feature: domain Description: DsbB Location: 15577-16027 bp Feature: gene Location: 16787-17203 bp Ori: ORU73361.1 Feature: domain Description: SufE Location: 16826-17180 bp Feature: domain Description: SufE Location: 16826-17180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)