myRT

myRT report for GCA_002100265.1_ASM210026v1

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Seq: MRJS01000073.1 Francisella tularensis subsp. holarctica strain FSC029 FSC029_73, whole genome shotgun sequence (45914 bp)
Overview 1 RT 1: 28360-31982 bp Neighborhood of RT #1 [28360, 31982] SufE DsbB RVT-UG4 Feature: gene Location: 28360-28776 bp Ori: ORU11803.1 Feature: domain Description: SufE Location: 28399-28753 bp Feature: domain Description: SufE Location: 28399-28753 bp Feature: gene Location: 29483-30019 bp Ori: ORU11804.1 Feature: domain Description: DsbB Location: 29516-29966 bp Feature: domain Description: DsbB Location: 2951 6-29966 bp Feature: gene Location: 30331-30558 bp Ori: ORU11805.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30397-30502 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30397-30502 bp Feature: gene Location: 31321-31734 bp Feature: gene Location: 31785-31982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRJS01000062.1 Francisella tularensis subsp. holarctica strain FSC029 FSC029_62, whole genome shotgun sequence (36470 bp)
Overview 1 RT 1: 1-4591 bp Neighborhood of RT #1 [1, 4596] RVT-Retrons KOG0539 rlmL Feature: gene Location: 1-382 bp Feature: gene Location: 354-848 bp Ori: ORU12036.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372-684 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372 -684 bp Feature: gene Location: 1814-2368 bp Ori: ORU12037.1 Feature: domain Description: KOG0539 Location: 1886-2363 bp Feature: domain Description: KOG0539 Location: 1886-2 363 bp Feature: gene Location: 2443-4596 bp Ori: ORU12038.1 Feature: domain Description: rlmL Location: 2455-4591 bp Feature: domain Description: rlmL Location: 2 455-4591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRJS01000094.1 Francisella tularensis subsp. holarctica strain FSC029 FSC029_94, whole genome shotgun sequence (7297 bp)
Overview 1 RT 1: 2232-7277 bp Neighborhood of RT #1 [2232, 7297] RVT-UG4 DUF2797 COG3415 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORU11458.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: gene Location: 6935-7297 bp Ori: ORU11459.1 Feature: domain Description: COG3415 Location: 6947-7277 bp Feature: domain Description: COG3 415 Location: 6947-7277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977), COG3415 (Transposase )