myRT

myRT report for GCA_002100405.1_ASM210040v1

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Seq: MRKU01000069.1 Francisella tularensis subsp. holarctica strain FDC310 FDC310_69, whole genome shotgun sequence (35889 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU60674.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 -373 bp Feature: gene Location: 1503-2057 bp Ori: ORU60648.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1 575-2052 bp Feature: gene Location: 2132-4285 bp Ori: ORU60649.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 21 44-4280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKU01000046.1 Francisella tularensis subsp. holarctica strain FDC310 FDC310_46, whole genome shotgun sequence (46128 bp)
Overview 1 RT 1: 28508-32130 bp Neighborhood of RT #1 [28508, 32130] SufE DsbB RVT-UG4 Feature: gene Location: 28508-28924 bp Ori: ORU61039.1 Feature: domain Description: SufE Location: 28547-28901 bp Feature: domain Description: SufE Location: 2 8547-2 8901 bp Feature: gene Location: 29631-30167 bp Ori: ORU61040.1 Feature: domain Description: DsbB Location: 29664-30114 bp Feature: domain Description: DsbB Location: 2 9664-30114 bp Feature: gene Location: 30479-30706 bp Ori: ORU61041.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30545-30650 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30545-30650 bp Feature: gene Location: 31469-31882 bp Feature: gene Location: 31933-32130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKU01000095.1 Francisella tularensis subsp. holarctica strain FDC310 FDC310_95, whole genome shotgun sequence (6943 bp)
Overview 1 RT 1: 2232-6541 bp Neighborhood of RT #1 [2232, 6558] RVT-UG4 DUF2797 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5743-6558 bp Ori: ORU60198.1 Feature: domain Description: DUF2797 Location: 5845-6541 bp Feature: domain Description: DUF2797 Location: 5845-6541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)