myRT

myRT report for GCA_002100415.1_ASM210041v1

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Seq: MRKT01000007.1 Francisella tularensis subsp. holarctica strain FDC338 FDC338_7, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 386-4713 bp Neighborhood of RT #1 [386, 4713] DUF2797 RVT-UG4 Feature: gene Location: 386-1201 bp Ori: ORU59886.1 Feature: domain Description: DUF2797 Location: 488-1184 bp Feature: domain Description: DUF2797 Location: 488-1 1 84 bp Feature: gene Location: 1442-1874 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1448-1628 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 448-1 628 bp Feature: gene Location: 1880-4151 bp Feature: gene Location: 4488-4713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2797 (pfam10977), RVT-UG4

Seq: MRKT01000064.1 Francisella tularensis subsp. holarctica strain FDC338 FDC338_64, whole genome shotgun sequence (15443 bp)
Overview 1 RT 1: 11159-15237 bp Neighborhood of RT #1 [11159, 15401] rlmL KOG0539 RVT-Retrons Feature: gene Location: 11159-13312 bp Ori: ORU58685.1 Feature: domain Description: rlmL Location: 11171-13307 bp Feature: domain Description: rlmL Location: 11171-13307 bp Feature: gene Location: 13387-13941 bp Ori: ORU58686.1 Feature: domain Description: KOG0539 Location: 13459-13936 bp Feature: domain Description: KOG0539 Location: 13459-13936 bp Feature: gene Location: 14907-15401 bp Ori: ORU58688.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14925-15237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1492 5-152 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons

Seq: MRKT01000005.1 Francisella tularensis subsp. holarctica strain FDC338 FDC338_5, whole genome shotgun sequence (33319 bp)
Overview 1 RT 1: 16118-19740 bp Neighborhood of RT #1 [16118, 19740] SufE DsbB RVT-UG4 Feature: gene Location: 16118-16534 bp Ori: ORU59951.1 Feature: domain Description: SufE Location: 16157-16511 bp Feature: domain Description: SufE Location: 16157-16511 bp Feature: gene Location: 17241-17777 bp Ori: ORU59952.1 Feature: domain Description: DsbB Location: 17274-17724 bp Feature: domain Description: DsbB Location: 17274-17724 bp Feature: gene Location: 18089-18316 bp Ori: ORU59953.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 18155-18260 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 18155-18260 bp Feature: gene Location: 19079-19492 bp Feature: gene Location: 19543-19740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4