myRT

myRT report for GCA_002100445.1_ASM210044v1

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Seq: MRKZ01000080.1 Francisella tularensis subsp. holarctica strain FDC113 FDC113_80, whole genome shotgun sequence (6942 bp)
Overview 1 RT 1: 386-4711 bp Neighborhood of RT #1 [386, 4711] DUF2797 RVT-UG4 Feature: gene Location: 386-1201 bp Ori: ORU69056.1 Feature: domain Description: DUF2797 Location: 488-1184 bp Feature: domain Description: DUF2797 Location: 488-1 1 84 bp Feature: gene Location: 1442-1750 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1448-1628 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 448-1 628 bp Feature: gene Location: 1878-4149 bp Feature: gene Location: 4486-4711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2797 (pfam10977), RVT-UG4

Seq: MRKZ01000006.1 Francisella tularensis subsp. holarctica strain FDC113 FDC113_6, whole genome shotgun sequence (36120 bp)
Overview 1 RT 1: 24-4261 bp Neighborhood of RT #1 [24, 4266] RVT-Retrons KOG0539 rlmL Feature: gene Location: 24-518 bp Ori: ORU69710.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42-354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 -354 bp Feature: gene Location: 1484-2038 bp Ori: ORU69684.1 Feature: domain Description: KOG0539 Location: 1556-2033 bp Feature: domain Description: KOG0539 Location: 1556-2 033 bp Feature: gene Location: 2113-4266 bp Ori: ORU69685.1 Feature: domain Description: rlmL Location: 2125-4261 bp Feature: domain Description: rlmL Location: 2 12 5-42 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKZ01000038.1 Francisella tularensis subsp. holarctica strain FDC113 FDC113_38, whole genome shotgun sequence (45248 bp)
Overview 1 RT 1: 28148-31668 bp Neighborhood of RT #1 [28148, 31668] SufE DsbB RVT-UG4 Feature: gene Location: 28148-28462 bp Ori: ORU69371.1 Feature: domain Description: SufE Location: 28187-28460 bp Feature: domain Description: SufE Location: 28187-28460 bp Feature: gene Location: 29169-29705 bp Ori: ORU69372.1 Feature: domain Description: DsbB Location: 29202-29652 bp Feature: domain Description: DsbB Location: 29202-29652 bp Feature: gene Location: 30017-30244 bp Ori: ORU69373.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30083-30188 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 0083 -3 0188 bp Feature: gene Location: 31007-31420 bp Feature: gene Location: 31471-31668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4