myRT

myRT report for GCA_002100505.1_ASM210050v1

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Seq: MRKK01000065.1 Francisella tularensis subsp. holarctica strain FDC420 FDC420_65, whole genome shotgun sequence (45248 bp)
Overview 1 RT 1: 28047-31669 bp Neighborhood of RT #1 [28047, 31669] SufE DsbB RVT-UG4 Feature: gene Location: 28047-28463 bp Ori: ORU39421.1 Feature: domain Description: SufE Location: 28086-28440 bp Feature: domain Description: SufE Location: 28086-28440 bp Feature: gene Location: 29170-29706 bp Ori: ORU39422.1 Feature: domain Description: DsbB Location: 29203-29653 bp Feature: domain Description: DsbB Location: 29203-29653 bp Feature: gene Location: 30018-30245 bp Ori: ORU39423.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30084-30189 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30084-301 89 bp Feature: gene Location: 31008-31421 bp Feature: gene Location: 31472-31669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKK01000069.1 Francisella tularensis subsp. holarctica strain FDC420 FDC420_69, whole genome shotgun sequence (36058 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU39241.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: gene Location: 1503-2057 bp Ori: ORU39214.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1575-2 052 bp Feature: gene Location: 2132-4285 bp Ori: ORU39215.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 2 144-42 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKK01000057.1 Francisella tularensis subsp. holarctica strain FDC420 FDC420_57, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 49-5132 bp Neighborhood of RT #1 [49, 5132] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 49-429 bp Ori: ORU39725.1 Feature: domain Description: COG3415 Location: 61-394 bp Feature: domain Description: COG3 415 Location: 61-3 94 bp Feature: gene Location: 805-1620 bp Ori: ORU39726.1 Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: gene Location: 1861-2293 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: gene Location: 2299-4570 bp Feature: gene Location: 4907-5132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4