myRT

myRT report for GCA_002100585.1_ASM210058v1

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Seq: MRJR01000044.1 Francisella tularensis subsp. holarctica strain FSC031 FSC031_44, whole genome shotgun sequence (7482 bp)
Overview 1 RT 1: 168-5251 bp Neighborhood of RT #1 [168, 5251] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 168-548 bp Ori: ORU14166.1 Feature: domain Description: COG3415 Location: 180-513 bp Feature: domain Description: COG341 5 Location: 1 80-51 3 bp Feature: gene Location: 924-1739 bp Ori: ORU14167.1 Feature: domain Description: DUF2797 Location: 1026-1722 bp Feature: domain Description: DUF2797 Location: 1 026-1 722 bp Feature: gene Location: 1980-2412 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1986-2166 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 986-21 66 bp Feature: gene Location: 2418-4689 bp Feature: gene Location: 5026-5251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4

Seq: MRJR01000083.1 Francisella tularensis subsp. holarctica strain FSC031 FSC031_83, whole genome shotgun sequence (35889 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU13374.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: gene Location: 1503-2057 bp Ori: ORU13348.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1575-2 052 bp Feature: gene Location: 2132-4285 bp Ori: ORU13349.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 2 144-42 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRJR01000015.1 Francisella tularensis subsp. holarctica strain FSC031 FSC031_15, whole genome shotgun sequence (45825 bp)
Overview 1 RT 1: 14136-17735 bp Neighborhood of RT #1 [14136, 17758] RVT-UG4 DsbB SufE Feature: gene Location: 14136-14333 bp Feature: gene Location: 14384-14797 bp Feature: gene Location: 15560-15787 bp Ori: ORU14575.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15626-15731 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15626-1573 1 bp Feature: gene Location: 16099-16635 bp Ori: ORU14576.1 Feature: domain Description: DsbB Location: 16132-16582 bp Feature: domain Description: DsbB Location: 1613 2-16582 bp Feature: gene Location: 17342-17758 bp Ori: ORU14577.1 Feature: domain Description: SufE Location: 17381-17735 bp Feature: domain Description: SufE Location: 173 81-1773 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)