myRT

myRT report for GCA_002100605.1_ASM210060v1

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Seq: MRKA01000023.1 Francisella tularensis subsp. holarctica strain FDC430 FDC430_23, whole genome shotgun sequence (35889 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU30271.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 -373 bp Feature: gene Location: 1503-2057 bp Ori: ORU30244.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1 575-2052 bp Feature: gene Location: 2132-4285 bp Ori: ORU30245.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 21 44-4280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKA01000053.1 Francisella tularensis subsp. holarctica strain FDC430 FDC430_53, whole genome shotgun sequence (46128 bp)
Overview 1 RT 1: 13999-17598 bp Neighborhood of RT #1 [13999, 17621] RVT-UG4 DsbB SufE Feature: gene Location: 13999-14196 bp Feature: gene Location: 14247-14660 bp Feature: gene Location: 15423-15650 bp Ori: ORU29337.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15489-15594 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15489-15594 bp Feature: gene Location: 15962-16498 bp Ori: ORU29338.1 Feature: domain Description: DsbB Location: 15995-16445 bp Feature: domain Description: DsbB Location: 15995-16445 bp Feature: gene Location: 17205-17621 bp Ori: ORU29339.1 Feature: domain Description: SufE Location: 17244-17598 bp Feature: domain Description: SufE Location: 172 44-17598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)

Seq: MRKA01000039.1 Francisella tularensis subsp. holarctica strain FDC430 FDC430_39, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 49-5132 bp Neighborhood of RT #1 [49, 5132] DUF2797 RVT-UG4 Feature: gene Location: 49-429 bp Feature: gene Location: 805-1620 bp Ori: ORU29773.1 Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: gene Location: 1861-2293 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: gene Location: 2299-4570 bp Feature: gene Location: 4907-5132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2797 (pfam10977), RVT-UG4