myRT

myRT report for GCA_002100665.1_ASM210066v1

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Seq: MRJN01000022.1 Francisella tularensis subsp. holarctica strain FSC555 FSC555_22, whole genome shotgun sequence (36390 bp)
Overview 1 RT 1: 1-4511 bp Neighborhood of RT #1 [1, 4516] RVT-Retrons KOG0539 rlmL Feature: gene Location: 1-302 bp Feature: gene Location: 274-768 bp Ori: ORU06007.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 292-604 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 292-604 bp Feature: gene Location: 1734-2288 bp Ori: ORU06008.1 Feature: domain Description: KOG0539 Location: 1806-2283 bp Feature: domain Description: KOG0539 Location: 1 806-2283 bp Feature: gene Location: 2363-4516 bp Ori: ORU06009.1 Feature: domain Description: rlmL Location: 2375-4511 bp Feature: domain Description: rlmL Location: 2375-451 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRJN01000025.1 Francisella tularensis subsp. holarctica strain FSC555 FSC555_25, whole genome shotgun sequence (45731 bp)
Overview 1 RT 1: 28301-31923 bp Neighborhood of RT #1 [28301, 31923] SufE DsbB RVT-UG4 Feature: gene Location: 28301-28717 bp Ori: ORU05930.1 Feature: domain Description: SufE Location: 28340-28694 bp Feature: domain Description: SufE Location: 2 8340-2 8694 bp Feature: gene Location: 29424-29960 bp Ori: ORU05931.1 Feature: domain Description: DsbB Location: 29457-29907 bp Feature: domain Description: DsbB Location: 2 9457-2 9907 bp Feature: gene Location: 30272-30499 bp Ori: ORU05932.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30338-30443 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30338-30443 bp Feature: gene Location: 31262-31675 bp Feature: gene Location: 31726-31923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRJN01000044.1 Francisella tularensis subsp. holarctica strain FSC555 FSC555_44, whole genome shotgun sequence (7173 bp)
Overview 1 RT 1: 1-4942 bp Neighborhood of RT #1 [1, 4942] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 1-239 bp Ori: ORU05631.1 Feature: domain Description: COG3415 Location: 10-187 bp Feature: domain Description: COG3 415 Location: 10-187 bp Feature: gene Location: 615-1430 bp Ori: ORU05629.1 Feature: domain Description: DUF2797 Location: 717-1413 bp Feature: domain Description: DUF2797 Location: 717-1413 bp Feature: gene Location: 1671-2103 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1677-1857 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1677-1857 bp Feature: gene Location: 2109-4380 bp Feature: gene Location: 4717-4942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4