myRT

myRT report for GCA_002100705.1_ASM210070v1

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Seq: MRJU01000085.1 Francisella tularensis subsp. holarctica strain FSC027 FSC027_85, whole genome shotgun sequence (7218 bp)
Overview 1 RT 1: 1-4987 bp Neighborhood of RT #1 [1, 4987] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 1-284 bp Ori: ORU16746.1 Feature: domain Description: COG3415 Location: 13-199 bp Feature: domain Description: COG341 5 Location: 1 3-1 99 bp Feature: gene Location: 660-1475 bp Ori: ORU16744.1 Feature: domain Description: DUF2797 Location: 762-1458 bp Feature: domain Description: DUF2797 Location: 762-1 458 bp Feature: gene Location: 1716-2148 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1722-1902 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 722-1 902 bp Feature: gene Location: 2154-4425 bp Feature: gene Location: 4762-4987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4

Seq: MRJU01000055.1 Francisella tularensis subsp. holarctica strain FSC027 FSC027_55, whole genome shotgun sequence (45880 bp)
Overview 1 RT 1: 28371-31993 bp Neighborhood of RT #1 [28371, 31993] SufE DsbB RVT-UG4 Feature: gene Location: 28371-28787 bp Ori: ORU17202.1 Feature: domain Description: SufE Location: 28410-28764 bp Feature: domain Description: SufE Location: 2 8410-2 8764 bp Feature: gene Location: 29494-30030 bp Ori: ORU17203.1 Feature: domain Description: DsbB Location: 29527-29977 bp Feature: domain Description: DsbB Location: 2 952 7-2 9977 bp Feature: gene Location: 30342-30569 bp Ori: ORU17204.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30408-30513 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30408-30513 bp Feature: gene Location: 31332-31745 bp Feature: gene Location: 31796-31993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRJU01000095.1 Francisella tularensis subsp. holarctica strain FSC027 FSC027_95, whole genome shotgun sequence (36481 bp)
Overview 1 RT 1: 31875-36431 bp Neighborhood of RT #1 [31875, 36481] rlmL KOG0539 RVT-Retrons DDE_3 Feature: gene Location: 31875-34028 bp Ori: ORU16546.1 Feature: domain Description: rlmL Location: 31887-34023 bp Feature: domain Description: rlmL Location: 3 1887-3 4023 bp Feature: gene Location: 34103-34657 bp Ori: ORU16547.1 Feature: domain Description: KOG0539 Location: 34175-34652 bp Feature: domain Description: KOG053 9 Location: 3 4175-3 4652 bp Feature: gene Location: 35623-36117 bp Ori: ORU16548.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35641-35953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 5641-3 5953 bp Feature: gene Location: 36089-36481 bp Ori: ORU16549.1 Feature: domain Description: DDE_3 Location: 36113-36431 bp Feature: domain Description: DDE_3 Location: 3 6113 -3 643 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons, DDE_3 (pfam13358)