myRT

myRT report for GCA_002100775.1_ASM210077v1

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Seq: MRJZ01000080.1 Francisella tularensis subsp. holarctica strain FDC431 FDC431_80, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 49-5132 bp Neighborhood of RT #1 [49, 5132] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 49-429 bp Ori: ORU25316.1 Feature: domain Description: COG3415 Location: 61-394 bp Feature: domain Description: COG341 5 Location: 61 -394 bp Feature: gene Location: 805-1620 bp Ori: ORU25317.1 Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: domain Description: DUF2797 Location: 907-1 603 bp Feature: gene Location: 1861-2293 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 867-2047 bp Feature: gene Location: 2299-4570 bp Feature: gene Location: 4907-5132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4

Seq: MRJZ01000004.1 Francisella tularensis subsp. holarctica strain FDC431 FDC431_4, whole genome shotgun sequence (45709 bp)
Overview 1 RT 1: 13580-17179 bp Neighborhood of RT #1 [13580, 17202] RVT-UG4 DsbB SufE Feature: gene Location: 13580-13777 bp Feature: gene Location: 13828-14241 bp Feature: gene Location: 15004-15231 bp Ori: ORU26531.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15070-15175 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15070-15175 bp Feature: gene Location: 15543-16079 bp Ori: ORU26532.1 Feature: domain Description: DsbB Location: 15576-16026 bp Feature: domain Description: DsbB Location: 15576-1602 6 bp Feature: gene Location: 16786-17202 bp Ori: ORU26533.1 Feature: domain Description: SufE Location: 16825-17179 bp Feature: domain Description: SufE Location: 1682 5-17179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)

Seq: MRJZ01000053.1 Francisella tularensis subsp. holarctica strain FDC431 FDC431_53, whole genome shotgun sequence (36058 bp)
Overview 1 RT 1: 31774-35852 bp Neighborhood of RT #1 [31774, 36016] rlmL KOG0539 RVT-Retrons Feature: gene Location: 31774-33927 bp Ori: ORU25779.1 Feature: domain Description: rlmL Location: 31786-33922 bp Feature: domain Description: rlmL Location: 3 1786-3 3 922 bp Feature: gene Location: 34002-34556 bp Ori: ORU25780.1 Feature: domain Description: KOG0539 Location: 34074-34551 bp Feature: domain Description: KOG053 9 Location: 3 4074-3 4551 bp Feature: gene Location: 35522-36016 bp Ori: ORU25782.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35540-35852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 5540-3 5852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons