myRT

myRT report for GCA_002100795.1_ASM210079v1

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Seq: MRKB01000043.1 Francisella tularensis subsp. holarctica strain FDC429 FDC429_43, whole genome shotgun sequence (46128 bp)
Overview 1 RT 1: 28508-32130 bp Neighborhood of RT #1 [28508, 32130] SufE DsbB RVT-UG4 Feature: gene Location: 28508-28924 bp Ori: ORU32518.1 Feature: domain Description: SufE Location: 28547-28901 bp Feature: domain Description: SufE Location: 28547-28901 bp Feature: gene Location: 29631-30167 bp Ori: ORU32519.1 Feature: domain Description: DsbB Location: 29664-30114 bp Feature: domain Description: DsbB Location: 29664-301 1 4 bp Feature: gene Location: 30479-30706 bp Ori: ORU32520.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30545-30650 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30545-30650 bp Feature: gene Location: 31469-31882 bp Feature: gene Location: 31933-32130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKB01000091.1 Francisella tularensis subsp. holarctica strain FDC429 FDC429_91, whole genome shotgun sequence (36348 bp)
Overview 1 RT 1: 31605-36281 bp Neighborhood of RT #1 [31605, 36331] rlmL KOG0539 RVT-Retrons DDE_3 Feature: gene Location: 31605-33758 bp Ori: ORU31704.1 Feature: domain Description: rlmL Location: 31617-33753 bp Feature: domain Description: rlmL Location: 31617-33753 bp Feature: gene Location: 33833-34387 bp Ori: ORU31705.1 Feature: domain Description: KOG0539 Location: 33905-34382 bp Feature: domain Description: KOG0539 Location: 33905-34382 bp Feature: gene Location: 35353-35847 bp Ori: ORU31706.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35371-35683 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35371-35683 bp Feature: gene Location: 35819-36331 bp Ori: ORU31707.1 Feature: domain Description: DDE_3 Location: 35864-36281 bp Feature: domain Description: DDE_3 Location: 35864-362 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons, DDE_3 (pfam13358)

Seq: MRKB01000092.1 Francisella tularensis subsp. holarctica strain FDC429 FDC429_92, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 2232-7280 bp Neighborhood of RT #1 [2232, 7315] RVT-UG4 DUF2797 COG3415 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORU31676.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: gene Location: 6935-7315 bp Ori: ORU31677.1 Feature: domain Description: COG3415 Location: 6947-7280 bp Feature: domain Description: COG3 415 Location: 6947-7280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977), COG3415 (Transposase )