myRT

myRT report for GCA_002100855.1_ASM210085v1

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Seq: MRKG01000094.1 Francisella tularensis subsp. holarctica strain FDC424 FDC424_94, whole genome shotgun sequence (7045 bp)
Overview 1 RT 1: 1-4814 bp Neighborhood of RT #1 [1, 4814] DUF2797 RVT-UG4 Feature: gene Location: 1-111 bp Feature: gene Location: 487-1302 bp Ori: ORU36489.1 Feature: domain Description: DUF2797 Location: 589-1285 bp Feature: domain Description: DUF2797 Location: 589-1 285 bp Feature: gene Location: 1543-1975 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1549-1729 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 549-1 729 bp Feature: gene Location: 1981-4252 bp Feature: gene Location: 4589-4814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2797 (pfam10977), RVT-UG4

Seq: MRKG01000027.1 Francisella tularensis subsp. holarctica strain FDC424 FDC424_27, whole genome shotgun sequence (45667 bp)
Overview 1 RT 1: 28047-31669 bp Neighborhood of RT #1 [28047, 31669] SufE DsbB RVT-UG4 Feature: gene Location: 28047-28463 bp Ori: ORU37638.1 Feature: domain Description: SufE Location: 28086-28440 bp Feature: domain Description: SufE Location: 2 8086-2 8440 bp Feature: gene Location: 29170-29706 bp Ori: ORU37639.1 Feature: domain Description: DsbB Location: 29203-29653 bp Feature: domain Description: DsbB Location: 2 92 03-2 9653 bp Feature: gene Location: 30018-30245 bp Ori: ORU37640.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30084-30189 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30084-30189 bp Feature: gene Location: 31008-31421 bp Feature: gene Location: 31472-31669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKG01000023.1 Francisella tularensis subsp. holarctica strain FDC424 FDC424_23, whole genome shotgun sequence (36348 bp)
Overview 1 RT 1: 18-4739 bp Neighborhood of RT #1 [18, 4744] DDE_3 RVT-Retrons KOG0539 rlmL Feature: gene Location: 18-530 bp Ori: ORU37754.1 Feature: domain Description: DDE_3 Location: 63-480 bp Feature: domain Description: DDE_3 Location: 63 -480 bp Feature: gene Location: 502-996 bp Ori: ORU37726.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 520-832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 520-83 2 bp Feature: gene Location: 1962-2516 bp Ori: ORU37727.1 Feature: domain Description: KOG0539 Location: 2034-2511 bp Feature: domain Description: KOG053 9 Location: 203 4-2511 bp Feature: gene Location: 2591-4744 bp Ori: ORU37728.1 Feature: domain Description: rlmL Location: 2603-4739 bp Feature: domain Description: rlmL Location: 2603 -473 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)