myRT

myRT report for GCA_002100865.1_ASM210086v1

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Seq: MRKF01000133.1 Francisella tularensis subsp. holarctica strain FDC425 FDC425_133, whole genome shotgun sequence (21789 bp)
Overview 1 RT 1: 4588-8210 bp Neighborhood of RT #1 [4588, 8210] SufE DsbB RVT-UG4 Feature: gene Location: 4588-5004 bp Ori: ORU38905.1 Feature: domain Description: SufE Location: 4627-4981 bp Feature: domain Description: SufE Location: 4627-4981 bp Feature: gene Location: 5711-6247 bp Ori: ORU38906.1 Feature: domain Description: DsbB Location: 5744-6194 bp Feature: domain Description: DsbB Location: 5744-61 94 bp Feature: gene Location: 6559-6786 bp Ori: ORU38907.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6625-6730 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6625-6730 bp Feature: gene Location: 7549-7962 bp Feature: gene Location: 8013-8210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKF01000059.1 Francisella tularensis subsp. holarctica strain FDC425 FDC425_59, whole genome shotgun sequence (4211 bp)
Overview 1 RT 1: 43-4211 bp Neighborhood of RT #1 [43, 4211] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU41765.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: gene Location: 1503-2057 bp Ori: ORU41763.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1575-2 052 bp Feature: gene Location: 2132-4211 bp Ori: ORU41764.1 Feature: domain Description: rlmL Location: 2144-4211 bp Feature: domain Description: rlmL Location: 2 144-42 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKF01000102.1 Francisella tularensis subsp. holarctica strain FDC425 FDC425_102, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 1333-5643 bp Neighborhood of RT #1 [1333, 5660] RVT-UG4 DUF2797 Feature: gene Location: 1333-1558 bp Feature: gene Location: 1895-4166 bp Feature: gene Location: 4172-4604 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-4358 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-43 58 bp Feature: gene Location: 4845-5660 bp Ori: ORU40099.1 Feature: domain Description: DUF2797 Location: 4947-5643 bp Feature: domain Description: DUF2797 Location: 4947-5643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)