myRT

myRT report for GCA_002100945.1_ASM210094v1

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Seq: MRKL01000082.1 Francisella tularensis subsp. holarctica strain FDC419 FDC419_82, whole genome shotgun sequence (35889 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU43300.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 -373 bp Feature: gene Location: 1503-2057 bp Ori: ORU43274.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1 575-2052 bp Feature: gene Location: 2132-4285 bp Ori: ORU43275.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 21 44-4280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKL01000057.1 Francisella tularensis subsp. holarctica strain FDC419 FDC419_57, whole genome shotgun sequence (45730 bp)
Overview 1 RT 1: 28529-32151 bp Neighborhood of RT #1 [28529, 32151] SufE DsbB RVT-UG4 Feature: gene Location: 28529-28945 bp Ori: ORU43597.1 Feature: domain Description: SufE Location: 28568-28922 bp Feature: domain Description: SufE Location: 2 8568-2 892 2 bp Feature: gene Location: 29652-30188 bp Ori: ORU43598.1 Feature: domain Description: DsbB Location: 29685-30135 bp Feature: domain Description: DsbB Location: 2 9685-30135 bp Feature: gene Location: 30500-30727 bp Ori: ORU43599.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30566-30671 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30566-30671 bp Feature: gene Location: 31490-31903 bp Feature: gene Location: 31954-32151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKL01000073.1 Francisella tularensis subsp. holarctica strain FDC419 FDC419_73, whole genome shotgun sequence (6944 bp)
Overview 1 RT 1: 2232-6542 bp Neighborhood of RT #1 [2232, 6559] RVT-UG4 DUF2797 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORU43425.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)