myRT

myRT report for GCA_002100955.1_ASM210095v1

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Seq: MRKO01000019.1 Francisella tularensis subsp. holarctica strain FDC416 FDC416_19, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 1333-5643 bp Neighborhood of RT #1 [1333, 5660] RVT-UG4 DUF2797 Feature: gene Location: 1333-1558 bp Feature: gene Location: 1895-4166 bp Feature: gene Location: 4172-4604 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-4358 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41 78-4358 bp Feature: gene Location: 4845-5660 bp Ori: ORU51260.1 Feature: domain Description: DUF2797 Location: 4947-5643 bp Feature: domain Description: DUF2797 Location: 4947-5643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)

Seq: MRKO01000068.1 Francisella tularensis subsp. holarctica strain FDC416 FDC416_68, whole genome shotgun sequence (35889 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU49442.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: gene Location: 1503-2057 bp Ori: ORU49415.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1575-2 052 bp Feature: gene Location: 2132-4285 bp Ori: ORU49416.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 2 144-42 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKO01000013.1 Francisella tularensis subsp. holarctica strain FDC416 FDC416_13, whole genome shotgun sequence (45248 bp)
Overview 1 RT 1: 28047-31669 bp Neighborhood of RT #1 [28047, 31669] SufE DsbB RVT-UG4 Feature: gene Location: 28047-28463 bp Ori: ORU51564.1 Feature: domain Description: SufE Location: 28086-28440 bp Feature: domain Description: SufE Location: 28086-28440 bp Feature: gene Location: 29170-29706 bp Ori: ORU51565.1 Feature: domain Description: DsbB Location: 29203-29653 bp Feature: domain Description: DsbB Location: 29203 -29653 bp Feature: gene Location: 30018-30245 bp Ori: ORU51566.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30084-30189 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 0084-3 0189 bp Feature: gene Location: 31008-31421 bp Feature: gene Location: 31472-31669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4