myRT

myRT report for GCA_002101015.1_ASM210101v1

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Seq: MRKQ01000089.1 Francisella tularensis subsp. holarctica strain FDC413 FDC413_89, whole genome shotgun sequence (45248 bp)
Overview 1 RT 1: 13580-17179 bp Neighborhood of RT #1 [13580, 17202] RVT-UG4 DsbB SufE Feature: gene Location: 13580-13777 bp Feature: gene Location: 13828-14241 bp Feature: gene Location: 15004-15231 bp Ori: ORU54044.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15070-15175 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 5070-1 51 75 bp Feature: gene Location: 15543-16079 bp Ori: ORU54045.1 Feature: domain Description: DsbB Location: 15576-16026 bp Feature: domain Description: DsbB Location: 1 5576-1 6026 bp Feature: gene Location: 16786-17202 bp Ori: ORU54046.1 Feature: domain Description: SufE Location: 16825-17179 bp Feature: domain Description: SufE Location: 1 6825-1 71 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)

Seq: MRKQ01000064.1 Francisella tularensis subsp. holarctica strain FDC413 FDC413_64, whole genome shotgun sequence (36058 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU54607.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: gene Location: 1503-2057 bp Ori: ORU54580.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1575-2 052 bp Feature: gene Location: 2132-4285 bp Ori: ORU54581.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 2 144-42 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKQ01000061.1 Francisella tularensis subsp. holarctica strain FDC413 FDC413_61, whole genome shotgun sequence (6944 bp)
Overview 1 RT 1: 2232-6542 bp Neighborhood of RT #1 [2232, 6559] RVT-UG4 DUF2797 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORU54631.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)