myRT

myRT report for GCA_002101035.1_ASM210103v1

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Seq: MRKS01000022.1 Francisella tularensis subsp. holarctica strain FDC411 FDC411_22, whole genome shotgun sequence (8045 bp)
Overview 1 RT 1: 43-4280 bp Neighborhood of RT #1 [43, 4285] RVT-Retrons KOG0539 rlmL Feature: gene Location: 43-537 bp Ori: ORU60034.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61-373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 -373 bp Feature: gene Location: 1503-2057 bp Ori: ORU60028.1 Feature: domain Description: KOG0539 Location: 1575-2052 bp Feature: domain Description: KOG0539 Location: 1 575-2052 bp Feature: gene Location: 2132-4285 bp Ori: ORU60029.1 Feature: domain Description: rlmL Location: 2144-4280 bp Feature: domain Description: rlmL Location: 21 44-4280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKS01000167.1 Francisella tularensis subsp. holarctica strain FDC411 FDC411_167, whole genome shotgun sequence (12481 bp)
Overview 1 RT 1: 3708-7330 bp Neighborhood of RT #1 [3708, 7330] SufE DsbB RVT-UG4 Feature: gene Location: 3708-4124 bp Ori: ORU57401.1 Feature: domain Description: SufE Location: 3747-4101 bp Feature: domain Description: SufE Location: 3747-4101 bp Feature: gene Location: 4831-5367 bp Ori: ORU57402.1 Feature: domain Description: DsbB Location: 4864-5314 bp Feature: domain Description: DsbB Location: 4864-5314 bp Feature: gene Location: 5679-5906 bp Ori: ORU57403.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5745-5850 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5745-5850 bp Feature: gene Location: 6669-7082 bp Feature: gene Location: 7133-7330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4

Seq: MRKS01000146.1 Francisella tularensis subsp. holarctica strain FDC411 FDC411_146, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 1333-5643 bp Neighborhood of RT #1 [1333, 5660] RVT-UG4 DUF2797 Feature: gene Location: 1333-1558 bp Feature: gene Location: 1895-4166 bp Feature: gene Location: 4172-4604 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-4358 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4178-43 58 bp Feature: gene Location: 4845-5660 bp Ori: ORU57661.1 Feature: domain Description: DUF2797 Location: 4947-5643 bp Feature: domain Description: DUF2797 Location: 4947-5643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)