myRT

myRT report for GCA_002101045.1_ASM210104v1

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Seq: MRKV01000095.1 Francisella tularensis subsp. holarctica strain FDC306 FDC306_95, whole genome shotgun sequence (36348 bp)
Overview 1 RT 1: 18-4739 bp Neighborhood of RT #1 [18, 4744] DDE_3 RVT-Retrons KOG0539 rlmL Feature: gene Location: 18-530 bp Ori: ORU63450.1 Feature: domain Description: DDE_3 Location: 63-480 bp Feature: domain Description: DDE_3 Location: 63-480 bp Feature: gene Location: 502-996 bp Ori: ORU63422.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 520-832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 520-832 bp Feature: gene Location: 1962-2516 bp Ori: ORU63423.1 Feature: domain Description: KOG0539 Location: 2034-2511 bp Feature: domain Description: KOG0539 Location: 2034-251 1 bp Feature: gene Location: 2591-4744 bp Ori: ORU63424.1 Feature: domain Description: rlmL Location: 2603-4739 bp Feature: domain Description: rlmL Location: 2603-4739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRKV01000047.1 Francisella tularensis subsp. holarctica strain FDC306 FDC306_47, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 49-5132 bp Neighborhood of RT #1 [49, 5132] COG3415 DUF2797 RVT-UG4 Feature: gene Location: 49-429 bp Ori: ORU64227.1 Feature: domain Description: COG3415 Location: 61-394 bp Feature: domain Description: COG3415 Location: 61-394 bp Feature: gene Location: 805-1620 bp Ori: ORU64228.1 Feature: domain Description: DUF2797 Location: 907-1603 bp Feature: domain Description: DUF2 797 Location: 907-1603 bp Feature: gene Location: 1861-2293 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2047 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1867-2 047 bp Feature: gene Location: 2299-4570 bp Feature: gene Location: 4907-5132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DUF2797 (pfam10977), RVT-UG4

Seq: MRKV01000098.1 Francisella tularensis subsp. holarctica strain FDC306 FDC306_98, whole genome shotgun sequence (45709 bp)
Overview 1 RT 1: 28508-32130 bp Neighborhood of RT #1 [28508, 32130] SufE DsbB RVT-UG4 Feature: gene Location: 28508-28924 bp Ori: ORU63370.1 Feature: domain Description: SufE Location: 28547-28901 bp Feature: domain Description: SufE Location: 28547-28901 bp Feature: gene Location: 29631-30167 bp Ori: ORU63371.1 Feature: domain Description: DsbB Location: 29664-30114 bp Feature: domain Description: DsbB Location: 29664-3 0114 bp Feature: gene Location: 30479-30706 bp Ori: ORU63372.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30545-30650 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 0545-3 0650 bp Feature: gene Location: 31469-31882 bp Feature: gene Location: 31933-32130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4