myRT

myRT report for GCA_002101595.1_ASM210159v1

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Seq: LQOM01000048.1 Mycobacterium celatum strain DSM 44243 contig_52, whole genome shotgun sequence (144987 bp)
Overview 1 RT 1: 20576-28121 bp Neighborhood of RT #1 [20576, 28201] SDR_subfam_1 YgiN RVT-GII GIIM FtsK_4TM FtsK MFS_XylE_like Feature: gene Location: 20576-21397 bp Feature: domain Description: SDR_subfam_1 Location: 20591-21392 bp Feature: domain Description: SDR_subfam_1 Location: 20591 -21 392 bp Feature: gene Location: 21397-21711 bp Feature: domain Description: YgiN Location: 21400-21676 bp Feature: domain Description: YgiN Location: 21 400-21 676 bp Feature: gene Location: 22549-23922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22900-23524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22900-23524 bp Feature: domain Description: GIIM Note: maturase Location: 23617-23830 bp Feature: domain Description: GIIM Note: maturase Location: 2361 7-23830 bp Feature: gene Location: 24033-26489 bp Feature: domain Description: FtsK_4TM Location: 24369-24723 bp Feature: domain Description: FtsK_4TM Location: 24369-24723 bp Feature: domain Description: FtsK Location: 24933-26433 bp Feature: domain Description: FtsK Location: 24933-26433 bp Feature: gene Location: 26852-28201 bp Feature: domain Description: MFS_XylE_like Location: 26864-28121 bp Feature: domain Description: MFS_XylE_like Location: 26864-281 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_subfam_1 (TIGR03971), YgiN (COG1359), RVT-GII, GIIM (pfam08388), FtsK_4TM (pfam13491), FtsK (COG1674), MFS_XylE_like (cd17359)

Seq: LQOM01000022.1 Mycobacterium celatum strain DSM 44243 contig_29, whole genome shotgun sequence (178844 bp)
Overview 1 RT 1: 63432-69796 bp Neighborhood of RT #1 [63432, 69804] DUF222 Beta-lactamase RVT-GII GIIM NcnH AcrR Feature: gene Location: 63432-64715 bp Feature: domain Description: DUF222 Location: 63516-64401 bp Feature: domain Description: DUF2 2 2 Location: 63516-64401 bp Feature: gene Location: 64753-65958 bp Feature: domain Description: Beta-lactamase Location: 64810-65872 bp Feature: domain Description: Beta-lactamase Location: 64810-65872 bp Feature: gene Location: 66059-67318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66275-66932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662 75-66932 bp Feature: domain Description: GIIM Note: maturase Location: 67016-67244 bp Feature: domain Description: GIIM Note: maturase Location: 67016-672 44 bp Feature: gene Location: 67967-69106 bp Feature: domain Description: NcnH Location: 67982-69071 bp Feature: domain Description: NcnH Location: 67982 -69071 bp Feature: gene Location: 69241-69804 bp Feature: domain Description: AcrR Location: 69301-69796 bp Feature: domain Description: AcrR Location: 69301-69796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF222 (pfam02720), Beta-lactamase (pfam00144), RVT-GII, GIIM (pfam08388), NcnH (cd01159), AcrR (COG1309)