myRT

myRT report for GCA_002102455.1_ASM210245v1

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Seq: MRBA01000037.1 Francisella tularensis subsp. holarctica strain FDC408 FDC408_37, whole genome shotgun sequence (6944 bp)
Overview 1 RT 1: 2232-6542 bp Neighborhood of RT #1 [2232, 6559] RVT-UG4 DUF2797 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORX26839.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)

Seq: MRBA01000026.1 Francisella tularensis subsp. holarctica strain FDC408 FDC408_26, whole genome shotgun sequence (36347 bp)
Overview 1 RT 1: 31604-36280 bp Neighborhood of RT #1 [31604, 36330] rlmL KOG0539 RVT-Retrons DDE_3 Feature: gene Location: 31604-33757 bp Ori: ORX27233.1 Feature: domain Description: rlmL Location: 31616-33752 bp Feature: domain Description: rlmL Location: 31616-33752 bp Feature: gene Location: 33832-34386 bp Ori: ORX27234.1 Feature: domain Description: KOG0539 Location: 33904-34381 bp Feature: domain Description: KOG0539 Location: 33904-34381 bp Feature: gene Location: 35352-35846 bp Ori: ORX27235.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35370-35682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35370-35682 bp Feature: gene Location: 35818-36330 bp Ori: ORX27236.1 Feature: domain Description: DDE_3 Location: 35863-36280 bp Feature: domain Description: DDE_3 Location: 35863-362 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons, DDE_3 (pfam13358)

Seq: MRBA01000038.1 Francisella tularensis subsp. holarctica strain FDC408 FDC408_38, whole genome shotgun sequence (45857 bp)
Overview 1 RT 1: 28529-32151 bp Neighborhood of RT #1 [28529, 32151] SufE DsbB RVT-UG4 Feature: gene Location: 28529-28945 bp Ori: ORX26810.1 Feature: domain Description: SufE Location: 28568-28922 bp Feature: domain Description: SufE Location: 28568-28922 bp Feature: gene Location: 29652-30188 bp Ori: ORX26811.1 Feature: domain Description: DsbB Location: 29685-30135 bp Feature: domain Description: DsbB Location: 29685-3 013 5 bp Feature: gene Location: 30500-30727 bp Ori: ORX26812.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30566-30671 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 0566-3 0671 bp Feature: gene Location: 31490-31903 bp Feature: gene Location: 31954-32151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufE (pfam02657), DsbB (pfam02600), RVT-UG4