myRT

myRT report for GCA_002102465.1_ASM210246v1

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Seq: MRBB01000059.1 Francisella tularensis subsp. holarctica strain FDC409 FDC409_59, whole genome shotgun sequence (7074 bp)
Overview 1 RT 1: 2232-6534 bp Neighborhood of RT #1 [2232, 6551] RVT-UG4 DUF2797 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2786-5057 bp Feature: gene Location: 5063-5495 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5069-5249 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5069-5249 bp Feature: gene Location: 5736-6551 bp Ori: ORX28642.1 Feature: domain Description: DUF2797 Location: 5838-6534 bp Feature: domain Description: DUF2797 Location: 5838-6534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)

Seq: MRBB01000013.1 Francisella tularensis subsp. holarctica strain FDC409 FDC409_13, whole genome shotgun sequence (36421 bp)
Overview 1 RT 1: 9-4730 bp Neighborhood of RT #1 [9, 4735] DDE_3 RVT-Retrons KOG0539 rlmL Feature: gene Location: 9-521 bp Ori: ORX29421.1 Feature: domain Description: DDE_3 Location: 54-471 bp Feature: domain Description: DDE_3 Location: 54-471 bp Feature: gene Location: 493-987 bp Ori: ORX29393.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 511-823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 511-82 3 bp Feature: gene Location: 1953-2507 bp Ori: ORX29394.1 Feature: domain Description: KOG0539 Location: 2025-2502 bp Feature: domain Description: KOG0539 Location: 2 02 5-2 502 bp Feature: gene Location: 2582-4735 bp Ori: ORX29395.1 Feature: domain Description: rlmL Location: 2594-4730 bp Feature: domain Description: rlmL Location: 2 594-4730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)

Seq: MRBB01000069.1 Francisella tularensis subsp. holarctica strain FDC409 FDC409_69, whole genome shotgun sequence (45837 bp)
Overview 1 RT 1: 13717-17316 bp Neighborhood of RT #1 [13717, 17339] RVT-UG4 DsbB SufE Feature: gene Location: 13717-13914 bp Feature: gene Location: 13965-14378 bp Feature: gene Location: 15141-15368 bp Ori: ORX28503.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15207-15312 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15207-153 12 bp Feature: gene Location: 15680-16216 bp Ori: ORX28504.1 Feature: domain Description: DsbB Location: 15713-16163 bp Feature: domain Description: DsbB Location: 15713 -16163 bp Feature: gene Location: 16923-17339 bp Ori: ORX28505.1 Feature: domain Description: SufE Location: 16962-17316 bp Feature: domain Description: SufE Location: 16962-173 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)